Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   F6I26_RS11035 Genome accession   NZ_CP126961
Coordinates   2143543..2143689 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain UMB4708     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 2138543..2148689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS11025 (F6I26_011025) comE 2141451..2142200 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  F6I26_RS11030 (F6I26_011030) comD/comD2 2142200..2143525 (-) 1326 WP_218969789.1 GHKL domain-containing protein Regulator
  F6I26_RS11035 (F6I26_011035) comC 2143543..2143689 (-) 147 WP_003029519.1 bacteriocin Regulator
  F6I26_RS11045 (F6I26_011045) rlmH 2143971..2144450 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  F6I26_RS11050 (F6I26_011050) htrA 2144644..2145834 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  F6I26_RS11055 (F6I26_011055) spo0J 2145889..2146656 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator
  F6I26_RS11060 (F6I26_011060) - 2146954..2148129 (+) 1176 WP_070811584.1 IS256-like element ISSag11 family transposase -

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=769595 F6I26_RS11035 WP_003029519.1 2143543..2143689(-) (comC) [Streptococcus anginosus strain UMB4708]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=769595 F6I26_RS11035 WP_003029519.1 2143543..2143689(-) (comC) [Streptococcus anginosus strain UMB4708]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396