Detailed information NTG0769550

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: F6I26_RS05255
• Genome accession: NZ_CP126961
• Coordinates: 1041146..1042258 (-)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus strain UMB4708
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1036146..1047258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6I26_RS05230 (F6I26_005230)	msrA	1037309..1037881 (-)	573	Protein_990	peptide-methionine (S)-S-oxide reductase MsrA	-
F6I26_RS05235 (F6I26_005235)	-	1037891..1038454 (-)	564	WP_024051562.1	redoxin domain-containing protein	-
F6I26_RS05240 (F6I26_005240)	ccdA2	1038468..1039181 (-)	714	WP_150887985.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
F6I26_RS05245 (F6I26_005245)	brnQ	1039315..1040643 (-)	1329	WP_024051564.1	branched-chain amino acid transport system II carrier protein	-
F6I26_RS05250 (F6I26_005250)	-	1040798..1041127 (-)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
F6I26_RS05255 (F6I26_005255)	rpoS	1041146..1042258 (-)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
F6I26_RS05260 (F6I26_005260)	dnaG	1042261..1044036 (-)	1776	WP_280921569.1	DNA primase	-
F6I26_RS05265 (F6I26_005265)	mscL	1044191..1044571 (+)	381	WP_070811355.1	large conductance mechanosensitive channel protein MscL	-
F6I26_RS05270 (F6I26_005270)	rpsU	1044813..1044989 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
F6I26_RS05275 (F6I26_005275)	-	1045184..1045522 (-)	339	WP_003024641.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=769550 F6I26_RS05255 WP_003024631.1 1041146..1042258(-) (rpoS) [Streptococcus anginosus strain UMB4708]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=769550 F6I26_RS05255 WP_003024631.1 1041146..1042258(-) (rpoS) [Streptococcus anginosus strain UMB4708]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAAGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTACGTTTGCGATTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37