Detailed information NTG0769466

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QQA21_RS21650
• Genome accession: NZ_CP126955
• Coordinates: 4398185..4399168 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O78:H4 strain APEC E123
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4393185..4404168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQA21_RS21620 (QQA21_21620)	-	4393851..4393958 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA21_RS21625 (QQA21_21625)	-	4394334..4394441 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA21_RS21630 (QQA21_21630)	-	4394817..4394924 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA21_RS21635 (QQA21_21635)	-	4395300..4395407 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA21_RS21640 (QQA21_21640)	yhjV	4395883..4397154 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
QQA21_RS21645 (QQA21_21645)	dppF	4397184..4398188 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QQA21_RS21650 (QQA21_21650)	amiE	4398185..4399168 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
QQA21_RS21655 (QQA21_21655)	dppC	4399179..4400081 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QQA21_RS21660 (QQA21_21660)	dppB	4400091..4401110 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QQA21_RS21665 (QQA21_21665)	dppA	4401418..4403025 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=769466 QQA21_RS21650 WP_001196486.1 4398185..4399168(-) (amiE) [Escherichia coli O78:H4 strain APEC E123]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=769466 QQA21_RS21650 WP_001196486.1 4398185..4399168(-) (amiE) [Escherichia coli O78:H4 strain APEC E123]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404