Detailed information NTG0768812

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: O8413_RS10210
• Genome accession: NZ_CP115188
• Coordinates: 2197432..2198439 (-)
• Length: 335 a.a.
• NCBI ID: WP_004728525.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain MT14
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2192432..2203439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O8413_RS10185 (O8413_10185)	rraA	2193070..2193600 (-)	531	WP_143680265.1	ribonuclease E activity regulator RraA	-
O8413_RS10190 (O8413_10190)	-	2193676..2194593 (-)	918	WP_014204315.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
O8413_RS10195 (O8413_10195)	hslU	2194687..2196018 (-)	1332	WP_158141355.1	HslU--HslV peptidase ATPase subunit	-
O8413_RS10200 (O8413_10200)	hslV	2196055..2196612 (-)	558	WP_014204312.1	ATP-dependent protease subunit HslV	-
O8413_RS10205 (O8413_10205)	-	2196751..2197302 (-)	552	WP_283512494.1	SPOR domain-containing protein	-
O8413_RS10210 (O8413_10210)	cytR	2197432..2198439 (-)	1008	WP_004728525.1	DNA-binding transcriptional regulator CytR	Regulator
O8413_RS10215 (O8413_10215)	priA	2198747..2200948 (-)	2202	WP_143680264.1	primosomal protein N'	-
O8413_RS10220 (O8413_10220)	rpmE	2201195..2201413 (+)	219	WP_004728523.1	50S ribosomal protein L31	-
O8413_RS10225 (O8413_10225)	-	2201624..2202898 (+)	1275	WP_014204309.1	malic enzyme-like NAD(P)-binding protein	-
O8413_RS10230 (O8413_10230)	metJ	2202975..2203292 (-)	318	WP_004728521.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36886.40 Da
• Isoelectric Point: 6.3510

>NTDB_id=768812 O8413_RS10210 WP_004728525.1 2197432..2198439(-) (cytR) [Vibrio furnissii strain MT14]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQIAGPEAAVLCQFRQQGYQQALRRAGISRNPTYSTIGDFTFESGAKAVRQLMALPEPPTA
IFCHNDTMAIGAIQEAKRLGMRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLD
TQLVIRESAAPPRSA

Nucleotide

• Length: 1008 bp

>NTDB_id=768812 O8413_RS10210 WP_004728525.1 2197432..2198439(-) (cytR) [Vibrio furnissii strain MT14]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTATCGACGGCGACAGTCTCGCGCGCTCTGATGAATCCCGAGAA
AGTTTCAGCCTCAACCCGTAAACGGGTTGAAGAGGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTTTAGCCCGAAATC
TGCGTCGCAATGAATCGAAAACCATTGTCGCGATCGTGCCGGACATCTGTGATCCTTATTACACCGAAATTATTCGTGGT
ATCGAAGACGCCGCGATGGAACACGGTTATCTGGTACTGCTGGGTGACAGCGGTCAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACTTGGTATTTACCAAACAGGCGGACGGTATGCTATTGCTGGGGACCGATTTGCCGTTTGACGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCAGAACTTGAATTGCCGACGGTGCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTGAACTATCTGACGCAGATGGGGCACAAACGCATCGCGCAGATTGCCGGTCCTGAAGC
GGCGGTGTTGTGTCAGTTCCGTCAGCAAGGGTATCAACAAGCCCTGCGCCGCGCGGGGATTTCACGCAATCCAACCTACA
GTACCATCGGTGACTTTACGTTTGAGTCGGGTGCCAAAGCGGTGCGCCAATTGATGGCCCTGCCGGAGCCGCCGACAGCC
ATTTTCTGTCACAACGATACCATGGCGATTGGTGCCATTCAGGAAGCCAAGCGTTTGGGCATGCGTGTGCCGCAAGACCT
GTCTGTGGTCGGCTTTGATGACATTCAGTTTGCGCAGTACTGCGATCCACCGCTAACCACCATTTCTCAGCCGCGTTACG
AGATCGGCCGTCAGGCGATGTTGATGATGCTTGAGTTACTGCGGGGTCATGATGTGCGTGCGGGCTCGCGTCTGCTCGAC
ACCCAATTGGTCATTCGCGAGAGTGCAGCGCCGCCCCGCTCGGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.373	99.104	0.925
cytR	Vibrio parahaemolyticus RIMD 2210633	90.149	100	0.901