Detailed information NTG0768801

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: O8413_RS08745
• Genome accession: NZ_CP115188
• Coordinates: 1888226..1891618 (+)
• Length: 1130 a.a.
• NCBI ID: WP_041942483.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain MT14
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1883226..1896618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O8413_RS08720 (O8413_08720)	erpA	1883585..1883926 (-)	342	WP_014204486.1	iron-sulfur cluster insertion protein ErpA	-
O8413_RS08725 (O8413_08725)	hemL	1884238..1885530 (+)	1293	WP_014204485.1	glutamate-1-semialdehyde 2,1-aminomutase	-
O8413_RS08730 (O8413_08730)	-	1885626..1885748 (-)	123	WP_004728990.1	hypothetical protein	-
O8413_RS08735 (O8413_08735)	-	1885824..1886909 (+)	1086	WP_283512437.1	AI-2E family transporter	-
O8413_RS08740 (O8413_08740)	rsmC	1887005..1888027 (+)	1023	WP_283512438.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
O8413_RS08745 (O8413_08745)	chiS	1888226..1891618 (+)	3393	WP_041942483.1	response regulator	Regulator
O8413_RS08750 (O8413_08750)	-	1892317..1893987 (+)	1671	WP_004728998.1	ABC transporter substrate-binding protein	-
O8413_RS08755 (O8413_08755)	-	1894152..1895138 (+)	987	WP_154180369.1	ABC transporter permease	-
O8413_RS08760 (O8413_08760)	-	1895141..1896166 (+)	1026	WP_004729001.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 128116.52 Da
• Isoelectric Point: 6.2694

>NTDB_id=768801 O8413_RS08745 WP_041942483.1 1888226..1891618(+) (chiS) [Vibrio furnissii strain MT14]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVTGSGDEVKTSVLPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDITGNVVYSIYKRENYGTNLLTGRFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDEQGRQFAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNTTSSMRTLLVGQDHRSRTLAYDQPEIDKSTQVIDWALNGSRSVGTYTNLDDEK
TIAAYAPINLKDLHWALVVELPEKEAFARIRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALTSGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIHRTAVNLSNATRLVLELSNHLLGKKQIRI
INQVAEEAPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISATRVDQHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDT
SRYRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPMASDDEIAQAQLTQQPHFQAPELTELDLPDHHSIPENP
TGPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLQAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAALPVI
MLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAEQRRLENAELQKELKHRAMVEASLLETQGRLLEQL
ESAPEAIVCIREDNKVRFANDAAARLFKRSQEQLKRSNADELIAQKYLLVEQDHYCGNVDIFIDDTRQHVNADVLRLPKG
AGLQAMYIFNVGGNINAARIHNLETAVEALSSYAFDGDKDKLQQLKELGGEFTRLADKASGDGQSKQELMRSVLVDAMTS
ALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQR
DKLQKLLTSE

Nucleotide

• Length: 3393 bp

>NTDB_id=768801 O8413_RS08745 WP_041942483.1 1888226..1891618(+) (chiS) [Vibrio furnissii strain MT14]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAAAATACCCTCATGCTCGCGTTCTTGGTTCTTAGCATCAC
CCCATTGACGGTGACGGCGATTTTTTTCCTTCAATCTCACAGTAAAGATCTTCAGGAACAAAGCACATCGCACCTTCTTT
CGGTCCGTGATACGAAGCAACAGCAAGTCATCGACTACCTCAGCGCGAAAGAGTCTGAAGTCATGGGCTTTGTTCGCTCA
GAACTGGCTTACGCCAGTGGTGGGCGTTTCTATGGGTTAGTGAACGCATTTCAACGCTTAGGCGTTGATATCGACCAAGC
ACGAGAGCATGCACAGCAGCGTTACGTCACTGGTTCTGGTGATGAAGTCAAAACCTCCGTGCTACCAGAATCGAGCAGTT
ATGTCGGCAGTGAGCGCTATCGCCTCCTGCACAAACGCTACCATTGGGCCTATCTCGAGCTACTCAAACGGTCCGACTTT
GATGACATCCTGTTGGTCGATATCACCGGCAACGTGGTGTACTCTATCTACAAGCGTGAGAACTACGGCACCAACTTGCT
CACGGGGCGATTCAAAGACAGTAACTTGGGGCAAACCTTCCGCCAGTTGGAACAGCAAGTCAGTGAGCATCGAAAAACCA
ACGAAGATTACACACCAGTGGTGTTGTCGGACTTTGTCGATGAGCAAGGCCGTCAATTTGCTTGGATGGGCGCCCCCATT
ATTCAACAAGGCTATCTGCACAGCTACGCCATGTTCCGTTTACCCAACAACGGCATCACCAAGCTGATCGCAGACACCAA
CACCACGTCATCGATGCGCACGTTATTGGTCGGTCAGGATCATCGTTCACGCACGCTGGCTTACGATCAACCGGAAATCG
ATAAAAGTACGCAAGTGATTGATTGGGCGCTCAATGGCAGCCGATCTGTCGGCACGTACACCAACCTTGATGACGAGAAA
ACCATCGCCGCTTACGCGCCGATCAATCTCAAGGACCTGCATTGGGCGTTGGTGGTCGAACTGCCTGAAAAAGAAGCTTT
CGCACGCATTCGCCAACTGGAAAAACTGTTCATCTTCGCGATGCTGACCGCCATTATTTTGGTGGTGATTGCCTCACACT
ACCTGTCGAATTTCATCACCTCGCCCCTGCTAAAACTGACATGGGCCGCTGAACGCGTGTCGGCTGGTGATTTAGATGAA
ACCATGATCAACACCGATCGGCGTGATGAAATTGGGCGACTGGCGGTCAGTTTTGAACGCATGCAGCGCTCGATTCGCGA
AAAAATGCAGCTGATTAAGGCACAGAATAAAGAGCTCGAGAGCAACATTCAGGTCATCCGTAAACAGAATGATGAGTTGC
AACTGGCCAACAAACTCAAAGATGAGTTTCTGGCCACAACATCCCATGAGCTGCGAACCCCACTGCATGGCATGATCGGG
ATTGCCGAAGCACTGACTTCCGGCGCCAATGGCCCAATCAACGCTGCGCATAAGTATCAACTCGACATCATCATCAGCAG
CGGGCAACGTTTGGCCACACTGGTCGATGACCTACTCGATTACCACAAAATGCGTTATGGCAATCTGGATATTCATCGCA
CGGCTGTCAATCTCTCTAATGCCACACGTTTGGTTTTGGAGCTGTCAAATCACCTGTTGGGTAAAAAACAGATTCGCATC
ATCAATCAGGTCGCAGAAGAAGCGCCGGTATGGGTCTCTGCTGATGCGCAGCGTCTTGAGCAAGTGTTGTACAACTTGAT
TGGCAACGCGATCAAATACACCTCCGAAGGCAAGATTGTCATTTCTGCCACTCGCGTTGACCAACACATTCGCGTGCAAG
TGGTGGATACCGGGCAAGGGATTCCGGCAGAGCAATTGGAACATATTTTCGAACCCCTGATTCAAGCCGGGCACGACACC
AGTCGCTACCGCCAAGGGGCCGGACTGGGCCTCTCGATCAGCCGTCAGTTGATCGAGCTGATGCAAGGGTCGCTGTATGT
CAGCAGTCAACCCATGGTCGGAACGACGTTTAGCTTCACACTGCCGATGGCCTCTGACGACGAAATCGCCCAAGCGCAGT
TGACGCAACAACCGCACTTCCAAGCGCCTGAATTGACTGAACTGGATCTGCCAGACCATCACAGCATTCCGGAGAATCCA
ACCGGGCCGTTGCTCTTGGTGGCTGATGATGAGCCGGTGAACTTACGCGTGCTCGATAGCTTCCTGCGTCTTGAAGGCTA
TCGCGTGCGCACCGCTCAGGATGGGAACGAAGTCCTGCAGGCCGTCGCAGAAGAGAAACCTGAATTGTTGCTACTGGACA
TCATGATGCCCGGCATGAGCGGCTATCAGGTGTGTGAAGAGCTGCGTAAAACGTACGATCATGCAGCGTTGCCAGTCATC
ATGCTCACCGCGCTCAATCAATCCGATGACCGAGTGCGCGGCTTTGAAGCCGGCGCCAACGATTATCTATCCAAACCGTT
CAATAAGCAGGAATTAGCCGCACGTATCGTCGCGCACTTGACCGCAAGTAAAGCGGAACAACGTCGCCTTGAGAACGCGG
AACTGCAAAAAGAACTCAAACATCGCGCCATGGTGGAAGCAAGCTTGCTGGAAACACAAGGCCGACTGCTGGAACAGCTG
GAATCAGCGCCAGAAGCGATTGTGTGCATTCGGGAAGATAACAAGGTTCGCTTTGCCAATGACGCCGCAGCGCGCCTGTT
TAAACGCAGTCAGGAACAGCTCAAACGCTCCAACGCTGACGAATTGATTGCGCAAAAATACTTGTTGGTCGAACAGGATC
ACTATTGTGGCAATGTCGACATCTTCATCGACGACACGCGCCAACACGTGAACGCCGATGTCTTGCGTCTGCCCAAAGGT
GCCGGATTGCAAGCGATGTATATCTTTAATGTCGGCGGTAACATTAACGCGGCGCGCATCCACAACCTTGAAACGGCGGT
TGAAGCCCTATCAAGTTACGCGTTTGACGGCGACAAAGATAAATTGCAACAACTCAAAGAGCTGGGCGGTGAATTCACAC
GCTTGGCCGACAAAGCCTCCGGTGACGGCCAATCCAAACAAGAGTTGATGCGTTCTGTTCTGGTCGATGCCATGACCTCC
GCCCTCAACTACTGGGAAAGAGTCTCTGGTCAAAGCAAGTTCACCTTTGCTGAACAAAGTGGGCTGTGGCGCGTCTACCT
CGATCGCAGTACGCTGCAAACTCGAACACTCGACAAATACCTGCGTATCGAAACACTGCCTAAAACGCCGCGCTGGCGCA
CCGTGCTTAACTCGTTAGATTACATTCTGGATCACTGCCAGGAACAAGGACCAGAACGCACTTACATTGAAGTGCAACGG
GATAAGTTACAAAAGCTACTGACGTCAGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS fold (PAS) (877-923)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (575-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.248	100	0.842