Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   O8413_RS00500 Genome accession   NZ_CP115188
Coordinates   112798..114159 (+) Length   453 a.a.
NCBI ID   WP_283513314.1    Uniprot ID   -
Organism   Vibrio furnissii strain MT14     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 107798..119159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O8413_RS00495 (O8413_00495) uvrB 110482..112512 (+) 2031 WP_004726644.1 excinuclease ABC subunit UvrB -
  O8413_RS00500 (O8413_00500) luxO 112798..114159 (+) 1362 WP_283513314.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  O8413_RS00505 (O8413_00505) luxU 114166..114504 (+) 339 WP_004726642.1 quorum-sensing phosphorelay protein LuxU -
  O8413_RS00510 (O8413_00510) - 114493..115383 (-) 891 WP_154180902.1 YvcK family protein -
  O8413_RS00515 (O8413_00515) moaA 115693..116682 (+) 990 WP_014205522.1 GTP 3',8-cyclase MoaA -
  O8413_RS00520 (O8413_00520) moaB 116753..117265 (+) 513 WP_004726639.1 molybdenum cofactor biosynthesis protein B -
  O8413_RS00525 (O8413_00525) moaC 117275..117754 (+) 480 WP_004726638.1 cyclic pyranopterin monophosphate synthase MoaC -
  O8413_RS00530 (O8413_00530) moaD 117751..117996 (+) 246 WP_004726637.1 molybdopterin synthase sulfur carrier subunit -
  O8413_RS00535 (O8413_00535) moaE 117998..118453 (+) 456 WP_014205521.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 453 a.a.        Molecular weight: 50387.67 Da        Isoelectric Point: 5.7310

>NTDB_id=768791 O8413_RS00500 WP_283513314.1 112798..114159(+) (luxO) [Vibrio furnissii strain MT14]
MVEDTASVAALYRSYLTPLEIDINIVGTGREAIESIAHREPDLILLDLRLPDMTGMDVLHAVKQRSPDVPVIFMTAHGSI
DTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKANKLKNETDNPGNQNYQGFIGSSQTMLAVYRTIDSAATSKASIFIT
GESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGGTLFLDELCEMDLD
LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLG
YMSKEEGKGFVRLAPDVVERFKQYEWPGNVRQLQNVLRNVVVLNEGREIALTMLPPPLNQLSDSRINVPKASPVPVSVHE
IFPLWMTEKQAIEKAIEACDGNIPRAAGYLDVSPSTIYRKLQTWNEKVQEKEK

Nucleotide


Download         Length: 1362 bp        

>NTDB_id=768791 O8413_RS00500 WP_283513314.1 112798..114159(+) (luxO) [Vibrio furnissii strain MT14]
ATGGTCGAAGACACGGCGTCGGTTGCGGCGTTGTATCGTTCGTACCTGACACCGCTCGAGATCGATATCAACATTGTCGG
AACGGGACGTGAAGCGATCGAGAGTATCGCCCATCGCGAGCCGGATCTGATCCTCCTCGATCTGCGCCTGCCGGACATGA
CGGGTATGGATGTCTTGCACGCGGTGAAACAGCGTTCACCGGATGTGCCGGTGATTTTTATGACGGCTCATGGCTCCATT
GATACCGCCGTCGAAGCCATGCGTCACGGTGCGCAAGATTTCCTCATCAAACCGTGCGAAGCCGACCGTTTGCGTGTGAC
GGTCAACAACGCCATTCGCAAGGCAAACAAACTCAAAAACGAAACCGACAATCCAGGTAATCAGAATTACCAAGGGTTCA
TTGGCAGCAGCCAGACCATGTTGGCGGTGTATCGCACCATCGACTCTGCGGCCACCAGTAAAGCGAGTATTTTCATTACC
GGCGAAAGTGGTACCGGTAAAGAGGTGTGCGCCGAAGCCATCCATGCGGCCAGCAAGCGCGGCGACAAGCCGTTCATTGC
CATTAACTGTGCGGCCATTCCCAAAGATCTGATTGAAAGTGAGCTGTTTGGTCACGTCAAAGGCGCGTTTACTGGCGCGG
CGACGGATCGTCAGGGCGCGGCAGAACTGGCCGATGGCGGCACCTTGTTCTTGGACGAGCTATGTGAAATGGATTTGGAT
CTGCAAACCAAGCTGCTGCGCTTTATTCAGACCGGGACCTTCCAGAAAGTCGGATCGTCTAAAATGAAGAGTGTGGACGT
GCGTTTTGTGTGTGCGACCAACCGTGACCCTTGGAAAGAAGTGCAAGAAGGGCGTTTTCGTGAAGACTTGTATTACCGTC
TGTACGTGATTCCGTTGCATTTGCCCCCTTTGCGTGAGCGCGGCGATGATGTGATTGAAATCGCGTATTCACTACTGGGG
TACATGTCGAAAGAAGAAGGTAAAGGCTTTGTACGTTTGGCGCCAGATGTCGTAGAGCGCTTCAAACAGTACGAATGGCC
GGGGAACGTGCGCCAGCTGCAGAACGTGCTGCGCAACGTGGTGGTGCTTAATGAAGGGCGTGAAATTGCGCTGACAATGC
TGCCGCCACCGCTGAACCAATTGAGTGACTCACGCATCAATGTCCCGAAAGCCAGCCCGGTGCCGGTGTCGGTGCATGAA
ATTTTCCCGTTATGGATGACAGAAAAGCAGGCAATCGAAAAAGCAATCGAGGCCTGTGATGGCAATATTCCGCGTGCTGC
GGGCTATTTGGATGTCAGTCCATCTACCATCTACCGCAAGCTGCAAACCTGGAATGAAAAGGTGCAGGAAAAGGAAAAGT
AA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(404-442)

Response regulator receiver domain (Response_reg)

(2-108)

Sigma-54 interaction domain (Sigma54_activat)

(134-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

90.828

98.675

0.896