Detailed information NTG0768789

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQA26_RS19130
• Genome accession: NZ_CP126934
• Coordinates: 3848920..3849945 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O78:H4 strain APEC E19057
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3843920..3854945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQA26_RS19100 (QQA26_19100)	zapB	3844004..3844249 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QQA26_RS19105 (QQA26_19105)	rraA	3844334..3844819 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QQA26_RS19110 (QQA26_19110)	menA	3844912..3845838 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQA26_RS19115 (QQA26_19115)	hslU	3845905..3847236 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QQA26_RS19120 (QQA26_19120)	hslV	3847246..3847776 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QQA26_RS19125 (QQA26_19125)	ftsN	3847869..3848828 (-)	960	WP_000068837.1	cell division protein FtsN	-
QQA26_RS19130 (QQA26_19130)	cytR	3848920..3849945 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QQA26_RS19135 (QQA26_19135)	priA	3850101..3852299 (-)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
QQA26_RS19140 (QQA26_19140)	rpmE	3852502..3852714 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=768789 QQA26_RS19130 WP_000644904.1 3848920..3849945(-) (cytR) [Escherichia coli O78:H4 strain APEC E19057]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=768789 QQA26_RS19130 WP_000644904.1 3848920..3849945(-) (cytR) [Escherichia coli O78:H4 strain APEC E19057]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628