Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   O9K61_RS07360 Genome accession   NZ_CP115185
Coordinates   1392916..1393380 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 26.3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1387916..1398380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O9K61_RS07340 (O9K61_07340) - 1388396..1390216 (+) 1821 WP_007409606.1 PAS domain-containing protein -
  O9K61_RS07345 (O9K61_07345) - 1390197..1391410 (-) 1214 Protein_1385 aminotransferase A -
  O9K61_RS07350 (O9K61_07350) - 1391611..1391772 (-) 162 WP_162889391.1 hypothetical protein -
  O9K61_RS07355 (O9K61_07355) cheV 1391961..1392872 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  O9K61_RS07360 (O9K61_07360) kre 1392916..1393380 (-) 465 WP_003154622.1 YkyB family protein Regulator
  O9K61_RS07365 (O9K61_07365) - 1393503..1394795 (-) 1293 WP_032868138.1 MFS transporter -
  O9K61_RS07370 (O9K61_07370) - 1394871..1395365 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  O9K61_RS07375 (O9K61_07375) - 1395440..1396303 (-) 864 WP_015239758.1 metallophosphoesterase -
  O9K61_RS07380 (O9K61_07380) fadH 1396448..1397212 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  O9K61_RS07385 (O9K61_07385) - 1397326..1397874 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=768743 O9K61_RS07360 WP_003154622.1 1392916..1393380(-) (kre) [Bacillus velezensis strain 26.3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=768743 O9K61_RS07360 WP_003154622.1 1392916..1393380(-) (kre) [Bacillus velezensis strain 26.3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929