Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   O9K61_RS01770 Genome accession   NZ_CP115185
Coordinates   331507..331905 (-) Length   132 a.a.
NCBI ID   WP_015239128.1    Uniprot ID   -
Organism   Bacillus velezensis strain 26.3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 326507..336905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O9K61_RS01745 (O9K61_01745) - 326679..327881 (+) 1203 WP_032867339.1 GTP-binding protein -
  O9K61_RS01750 (O9K61_01750) - 327946..329082 (+) 1137 WP_007409359.1 zinc-dependent alcohol dehydrogenase -
  O9K61_RS01755 (O9K61_01755) - 329097..329531 (+) 435 WP_007409358.1 RDD family protein -
  O9K61_RS01760 (O9K61_01760) - 329648..329926 (+) 279 WP_263612330.1 YckD family protein -
  O9K61_RS01765 (O9K61_01765) - 330030..331466 (+) 1437 WP_032867342.1 glycoside hydrolase family 1 protein -
  O9K61_RS01770 (O9K61_01770) nin/comJ 331507..331905 (-) 399 WP_015239128.1 competence protein ComJ Regulator
  O9K61_RS01775 (O9K61_01775) nucA/comI 331926..332363 (-) 438 WP_032867344.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  O9K61_RS01780 (O9K61_01780) hxlB 332721..333278 (-) 558 WP_032867345.1 6-phospho-3-hexuloisomerase -
  O9K61_RS01785 (O9K61_01785) hxlA 333275..333910 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  O9K61_RS01790 (O9K61_01790) - 334143..334505 (+) 363 WP_007409352.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14894.84 Da        Isoelectric Point: 4.7846

>NTDB_id=768721 O9K61_RS01770 WP_015239128.1 331507..331905(-) (nin/comJ) [Bacillus velezensis strain 26.3]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAELSDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=768721 O9K61_RS01770 WP_015239128.1 331507..331905(-) (nin/comJ) [Bacillus velezensis strain 26.3]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAATTATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758