Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PCQ86_RS16770 Genome accession   NZ_CP115182
Coordinates   3456580..3456972 (-) Length   130 a.a.
NCBI ID   WP_011806675.1    Uniprot ID   A0A6M6I9J5
Organism   Diaphorobacter sp. ED-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3451580..3461972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PCQ86_RS16755 - 3453373..3455637 (-) 2265 WP_270174256.1 methyl-accepting chemotaxis protein -
  PCQ86_RS16760 - 3455659..3456186 (-) 528 WP_270174257.1 chemotaxis protein CheW -
  PCQ86_RS16765 - 3456203..3456568 (-) 366 WP_011806674.1 response regulator -
  PCQ86_RS16770 pilG 3456580..3456972 (-) 393 WP_011806675.1 response regulator Regulator
  PCQ86_RS16775 - 3457024..3457176 (-) 153 WP_011806676.1 rubredoxin -
  PCQ86_RS16780 - 3457292..3458236 (+) 945 WP_135148301.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  PCQ86_RS16785 hemL 3458220..3459524 (+) 1305 WP_270174258.1 glutamate-1-semialdehyde 2,1-aminomutase -
  PCQ86_RS16790 - 3459707..3461467 (+) 1761 WP_270174259.1 alkaline phosphatase D family protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14430.55 Da        Isoelectric Point: 6.4477

>NTDB_id=768687 PCQ86_RS16770 WP_011806675.1 3456580..3456972(-) (pilG) [Diaphorobacter sp. ED-3]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAH
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=768687 PCQ86_RS16770 WP_011806675.1 3456580..3456972(-) (pilG) [Diaphorobacter sp. ED-3]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCCAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCAT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGCATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M6I9J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508