Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ORQ91_RS17105 Genome accession   NZ_CP115172
Coordinates   3396242..3396670 (+) Length   142 a.a.
NCBI ID   WP_024424305.1    Uniprot ID   A0A5C0WGQ8
Organism   Bacillus safensis strain BS-10L     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3391242..3401670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS17095 (ORQ91_03422) - 3391827..3393815 (-) 1989 WP_270126098.1 hydantoinase B/oxoprolinase family protein -
  ORQ91_RS17100 (ORQ91_03423) - 3393805..3395874 (-) 2070 WP_270126100.1 hydantoinase/oxoprolinase family protein -
  ORQ91_RS17105 (ORQ91_03424) nucA/comI 3396242..3396670 (+) 429 WP_024424305.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ORQ91_RS17110 (ORQ91_03425) - 3396798..3398495 (+) 1698 WP_122631503.1 methyl-accepting chemotaxis protein -
  ORQ91_RS17115 (ORQ91_03426) - 3398614..3399000 (+) 387 WP_122631504.1 competence protein ComJ -
  ORQ91_RS17120 (ORQ91_03427) - 3399002..3399808 (-) 807 WP_270126104.1 aminoglycoside N(3)-acetyltransferase -
  ORQ91_RS17125 (ORQ91_03428) - 3399837..3400253 (-) 417 WP_025092811.1 Lrp/AsnC family transcriptional regulator -
  ORQ91_RS17130 (ORQ91_03429) - 3400369..3401133 (+) 765 WP_122631506.1 MBL fold metallo-hydrolase -
  ORQ91_RS17135 (ORQ91_03430) - 3401177..3401506 (-) 330 WP_024424311.1 YckD family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15971.96 Da        Isoelectric Point: 6.2215

>NTDB_id=768578 ORQ91_RS17105 WP_024424305.1 3396242..3396670(+) (nucA/comI) [Bacillus safensis strain BS-10L]
MKLLKMILLLLLIVIGVATGYIQLEQGKQETANSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKHSDEQRDRS
LHGVPTKRGYDRDEWPMAMCKEGGTGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIID

Nucleotide


Download         Length: 429 bp        

>NTDB_id=768578 ORQ91_RS17105 WP_024424305.1 3396242..3396670(+) (nucA/comI) [Bacillus safensis strain BS-10L]
ATGAAACTTCTTAAAATGATTCTCTTGCTTTTATTGATTGTTATTGGTGTAGCAACAGGCTATATCCAGCTGGAGCAAGG
GAAACAAGAGACAGCGAATTCATCTTATGACAAAACGATTCATTTTCCATCAGACCGCTATCCCGAAACAGCCAAGCACA
TAGAAGAAGCCATTGATGAAGGTCATTCATCCATTTGTACAATTGACCGTAAACATAGTGATGAGCAGAGGGATCGATCA
TTACATGGCGTTCCAACAAAGCGCGGGTATGATCGTGACGAATGGCCAATGGCAATGTGCAAAGAAGGAGGCACAGGAGC
TTCTGTCAAATATGTACGCCCTTCTGATAATAGAGGCGCAGGCTCGTGGGTAAGTCATCAATTATCGGATGATCCTGACG
GCACAAGAATTCAATTTATCATCGATTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WGQ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

66.667

80.282

0.535