Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ORQ91_RS12250 Genome accession   NZ_CP115172
Coordinates   2393608..2394069 (+) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain BS-10L     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2388608..2399069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS12220 (ORQ91_02444) - 2388944..2390221 (+) 1278 WP_024426859.1 MFS transporter -
  ORQ91_RS12225 (ORQ91_02445) - 2390482..2390697 (+) 216 WP_024424712.1 hypothetical protein -
  ORQ91_RS12230 (ORQ91_02447) - 2390834..2391744 (-) 911 Protein_2415 DMT family transporter -
  ORQ91_RS12235 (ORQ91_02448) - 2391858..2392775 (+) 918 WP_122631271.1 AraC family transcriptional regulator -
  ORQ91_RS12240 (ORQ91_02449) - 2392903..2393079 (-) 177 WP_166644676.1 hypothetical protein -
  ORQ91_RS12250 (ORQ91_02450) kre 2393608..2394069 (+) 462 WP_008356877.1 YkyB family protein Regulator
  ORQ91_RS12255 (ORQ91_02451) - 2394107..2395015 (-) 909 WP_024424709.1 chemotaxis protein -
  ORQ91_RS12260 (ORQ91_02452) - 2395089..2396399 (-) 1311 WP_122631269.1 MFS transporter -
  ORQ91_RS12265 (ORQ91_02453) - 2396523..2397062 (-) 540 WP_024424707.1 RDD family protein -
  ORQ91_RS12270 (ORQ91_02454) - 2397364..2397516 (+) 153 WP_162842519.1 hypothetical protein -
  ORQ91_RS12275 (ORQ91_02455) - 2397581..2398465 (-) 885 WP_122631268.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=768561 ORQ91_RS12250 WP_008356877.1 2393608..2394069(+) (kre) [Bacillus safensis strain BS-10L]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=768561 ORQ91_RS12250 WP_008356877.1 2393608..2394069(+) (kre) [Bacillus safensis strain BS-10L]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAACCCGTCTTCAAACGTCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765