Detailed information NTG0768561

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QQA27_RS00875
• Genome accession: NZ_CP126928
• Coordinates: 185055..186038 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O2:K1:H4 strain APEC E12053
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 180055..191038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQA27_RS00860 (QQA27_00860)	dppA	181355..182962 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
QQA27_RS00865 (QQA27_00865)	dppB	183113..184132 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QQA27_RS00870 (QQA27_00870)	dppC	184142..185044 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QQA27_RS00875 (QQA27_00875)	amiE	185055..186038 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
QQA27_RS00880 (QQA27_00880)	dppF	186035..187039 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QQA27_RS00885 (QQA27_00885)	yhjV	187069..188340 (-)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
QQA27_RS00890 (QQA27_00890)	-	188816..188923 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA27_RS00895 (QQA27_00895)	-	189298..189405 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QQA27_RS00900 (QQA27_00900)	-	189781..189888 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=768561 QQA27_RS00875 WP_001196477.1 185055..186038(+) (amiE) [Escherichia coli O2:K1:H4 strain APEC E12053]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=768561 QQA27_RS00875 WP_001196477.1 185055..186038(+) (amiE) [Escherichia coli O2:K1:H4 strain APEC E12053]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404