Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ORQ91_RS10345 Genome accession   NZ_CP115172
Coordinates   2015461..2015841 (-) Length   126 a.a.
NCBI ID   WP_051149980.1    Uniprot ID   -
Organism   Bacillus safensis strain BS-10L     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2010461..2020841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS10310 (ORQ91_02063) - 2011048..2011278 (-) 231 WP_206533828.1 DUF896 domain-containing protein -
  ORQ91_RS10315 (ORQ91_02064) - 2011348..2011995 (-) 648 WP_206533829.1 recombinase family protein -
  ORQ91_RS10320 (ORQ91_02065) yneA 2012013..2012324 (-) 312 WP_024425130.1 cell division suppressor protein YneA -
  ORQ91_RS10325 (ORQ91_02066) lexA 2012483..2013103 (+) 621 WP_024427080.1 transcriptional repressor LexA -
  ORQ91_RS10330 (ORQ91_02067) - 2013148..2013597 (-) 450 WP_073205718.1 hypothetical protein -
  ORQ91_RS10335 (ORQ91_02068) - 2013892..2014434 (+) 543 WP_122631360.1 IseA DL-endopeptidase inhibitor family protein -
  ORQ91_RS10340 (ORQ91_02069) - 2014467..2015315 (-) 849 WP_122631361.1 STAS domain-containing protein -
  ORQ91_RS10345 (ORQ91_02070) nucA/comI 2015461..2015841 (-) 381 WP_051149980.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ORQ91_RS10350 (ORQ91_02071) - 2016099..2017007 (-) 909 WP_024425124.1 trypsin-like serine peptidase -
  ORQ91_RS10355 (ORQ91_02072) - 2017201..2020344 (-) 3144 WP_270125050.1 bifunctional cytochrome P450/NADPH--P450 reductase -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13761.43 Da        Isoelectric Point: 8.5068

>NTDB_id=768554 ORQ91_RS10345 WP_051149980.1 2015461..2015841(-) (nucA/comI) [Bacillus safensis strain BS-10L]
MGTLFGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=768554 ORQ91_RS10345 WP_051149980.1 2015461..2015841(-) (nucA/comI) [Bacillus safensis strain BS-10L]
ATGGGCACGTTGTTTGGCGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGGGCAGGCTCATG
GGTCGGGCATCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548