Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ORQ91_RS07360 Genome accession   NZ_CP115172
Coordinates   1456092..1456862 (+) Length   256 a.a.
NCBI ID   WP_044332056.1    Uniprot ID   A0A5C0WLP6
Organism   Bacillus safensis strain BS-10L     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1451092..1461862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS07330 (ORQ91_01470) - 1451399..1453510 (+) 2112 WP_370880885.1 HD family phosphohydrolase -
  ORQ91_RS07335 (ORQ91_01471) ybeY 1453511..1453990 (+) 480 WP_024423021.1 rRNA maturation RNase YbeY -
  ORQ91_RS07340 (ORQ91_01472) - 1453968..1454354 (+) 387 WP_073206342.1 diacylglycerol kinase family protein -
  ORQ91_RS07345 (ORQ91_01473) - 1454468..1454866 (+) 399 WP_008356263.1 cytidine deaminase -
  ORQ91_RS07350 (ORQ91_01474) era 1454859..1455764 (+) 906 WP_007501305.1 GTPase Era -
  ORQ91_RS07355 (ORQ91_01475) - 1455913..1456056 (+) 144 WP_003217288.1 YqzL family protein -
  ORQ91_RS07360 (ORQ91_01476) recO 1456092..1456862 (+) 771 WP_044332056.1 DNA repair protein RecO Machinery gene
  ORQ91_RS07365 (ORQ91_01477) glyQ 1457192..1458079 (+) 888 WP_012010611.1 glycine--tRNA ligase subunit alpha -
  ORQ91_RS07370 (ORQ91_01478) glyS 1458072..1460117 (+) 2046 WP_044332053.1 glycine--tRNA ligase subunit beta -
  ORQ91_RS07375 (ORQ91_01479) - 1460285..1460923 (+) 639 WP_024423017.1 helix-turn-helix transcriptional regulator -
  ORQ91_RS07380 (ORQ91_01480) - 1460949..1461770 (+) 822 WP_008342399.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29337.98 Da        Isoelectric Point: 8.1204

>NTDB_id=768547 ORQ91_RS07360 WP_044332056.1 1456092..1456862(+) (recO) [Bacillus safensis strain BS-10L]
MLIKSEGIVLRTTDYGETNKIVTLLTREHGKIGVMARGAKKSNSRLSAISQPFLYGTFLIQSSTGLGTLQQGEMIESMRT
IREDLFLTAYAAYMTELMDKGTEEKKPNPYLFELLLQSLRHLNEGTDADIILFIVEVKMLSVMGMKPELDQCVHCGQKEG
QFHFSIRDNGFICQNCFSKDPYKLPLSPAAARLLRLFHYFDLSRLGQVDVKQQTKQEIRQVLDHYYDEYSGLYLKSKKFM
NQMESMKKLMGDENKS

Nucleotide


Download         Length: 771 bp        

>NTDB_id=768547 ORQ91_RS07360 WP_044332056.1 1456092..1456862(+) (recO) [Bacillus safensis strain BS-10L]
ATGCTCATTAAAAGTGAAGGAATCGTCCTTAGAACAACAGATTATGGCGAAACAAACAAAATTGTCACGCTGCTCACTAG
AGAACATGGAAAAATTGGCGTGATGGCCAGAGGCGCTAAAAAATCAAACAGCCGCCTGTCAGCCATAAGCCAGCCGTTTT
TATACGGCACCTTTCTCATCCAATCATCAACAGGACTTGGAACGCTCCAGCAAGGCGAAATGATTGAAAGTATGCGGACC
ATTCGGGAAGACTTATTTCTGACCGCATATGCCGCATATATGACGGAATTAATGGATAAAGGGACAGAAGAAAAAAAGCC
AAACCCTTATTTGTTTGAGCTTCTGCTTCAATCTCTGCGTCATCTCAACGAAGGCACAGATGCTGATATTATTTTATTTA
TCGTAGAGGTCAAAATGTTATCAGTGATGGGGATGAAGCCTGAACTTGATCAATGTGTCCACTGTGGTCAAAAAGAAGGG
CAGTTCCATTTCTCGATAAGAGATAACGGCTTCATTTGCCAAAATTGTTTTTCGAAAGATCCATATAAACTGCCCTTATC
CCCCGCAGCTGCAAGGCTACTCCGTTTGTTTCATTATTTTGATTTATCAAGGCTTGGTCAGGTTGATGTGAAACAGCAGA
CGAAACAAGAAATTCGTCAAGTGCTTGATCACTACTATGACGAATATTCCGGCCTCTATTTAAAATCAAAAAAATTCATG
AATCAGATGGAATCCATGAAAAAGCTAATGGGTGACGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C0WLP6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

75.391

100

0.754