Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   O7R04_RS06945 Genome accession   NZ_CP115158
Coordinates   1328155..1328751 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain MBLB 0692     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323155..1333751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O7R04_RS06915 (O7R04_06915) - 1323369..1323824 (+) 456 WP_048367197.1 flavodoxin -
  O7R04_RS06920 (O7R04_06920) dapD 1323906..1324616 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  O7R04_RS06925 (O7R04_06925) - 1324687..1325811 (+) 1125 WP_139885251.1 N-acetyldiaminopimelate deacetylase -
  O7R04_RS06930 (O7R04_06930) - 1325872..1326117 (+) 246 WP_003154596.1 YkuS family protein -
  O7R04_RS06935 (O7R04_06935) - 1326151..1326957 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  O7R04_RS06940 (O7R04_06940) - 1327245..1327703 (+) 459 WP_139885252.1 TlpA disulfide reductase family protein -
  O7R04_RS06945 (O7R04_06945) rok 1328155..1328751 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  O7R04_RS06950 (O7R04_06950) - 1328772..1329764 (-) 993 WP_003154589.1 hypothetical protein -
  O7R04_RS06955 (O7R04_06955) - 1329910..1330512 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  O7R04_RS06960 (O7R04_06960) - 1330564..1331583 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  O7R04_RS06965 (O7R04_06965) glp 1331601..1332893 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  O7R04_RS06970 (O7R04_06970) mobB 1332854..1333375 (+) 522 WP_139885253.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=768413 O7R04_RS06945 WP_003154591.1 1328155..1328751(+) (rok) [Bacillus velezensis strain MBLB 0692]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=768413 O7R04_RS06945 WP_003154591.1 1328155..1328751(+) (rok) [Bacillus velezensis strain MBLB 0692]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCTGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843