Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   QPX68_RS15410 Genome accession   NZ_CP126696
Coordinates   3130265..3131626 (-) Length   453 a.a.
NCBI ID   WP_032876597.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain GZY63     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3125265..3136626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPX68_RS15385 - 3125372..3126196 (-) 825 WP_012118397.1 ABC transporter ATP-binding protein -
  QPX68_RS15390 - 3126352..3126789 (-) 438 WP_032876609.1 YusW family protein -
  QPX68_RS15395 - 3126908..3128689 (-) 1782 WP_032876606.1 M3 family oligoendopeptidase -
  QPX68_RS15400 - 3128822..3129664 (+) 843 WP_032876604.1 oxidoreductase -
  QPX68_RS15405 - 3129754..3130218 (+) 465 WP_032876601.1 Dps family protein -
  QPX68_RS15410 htrA 3130265..3131626 (-) 1362 WP_032876597.1 trypsin-like peptidase domain-containing protein Regulator
  QPX68_RS15415 - 3131903..3132580 (+) 678 WP_032876594.1 response regulator transcription factor -
  QPX68_RS15420 - 3132577..3133932 (+) 1356 WP_032876591.1 HAMP domain-containing sensor histidine kinase -
  QPX68_RS15425 spxO 3133961..3134125 (-) 165 WP_007410067.1 anti-adapter protein SpxO -
  QPX68_RS15430 - 3134304..3135179 (+) 876 WP_017418948.1 TetR/AcrR family transcriptional regulator -
  QPX68_RS15435 fumC 3135216..3136604 (-) 1389 WP_032876589.1 class II fumarate hydratase -

Sequence

Protein


Download         Length: 453 a.a.        Molecular weight: 47986.45 Da        Isoelectric Point: 4.9330

>NTDB_id=768354 QPX68_RS15410 WP_032876597.1 3130265..3131626(-) (htrA) [Bacillus amyloliquefaciens strain GZY63]
MNDHRDDGRSRDQSDLSHTEQNRNEQQRISHQEPELLEEPVSKEAENETAAGTEFEKTAAVKKEKKRRAAWLSPVLGGII
GGGLVLGIVPNLPSEQHKTEAVSDTKQVQSSNFTSTPLKNTSSVADMVEDLEPAIVGVSNYQASQSSQFGLDGGSSSETE
SGTGSGVIFKKDGEKAYIITNNHVVEGANKLSVTLYNGKTETAKLVGKDAISDLAVLEISSSNVKKAASFGDSSKLRIAD
KVIAIGNPLGQQFSGTVTQGVISGLNRTVDADTSQGTVEMNVIQTDAAINPGNSGGPLINSSGQVIGINSMKVSENGVES
LGFAIPSNDVEPIVDQLLAKGKVERPFLGVQMIDMSQVPETYQENTLGLFGDQLSKGVYVKEVQSGSPAAKAGIKSNDVI
VQLNGKDVGSSADIRQILYNQLKIGDKTTVQVLRNGSKKTLNVTLTKQTESAS

Nucleotide


Download         Length: 1362 bp        

>NTDB_id=768354 QPX68_RS15410 WP_032876597.1 3130265..3131626(-) (htrA) [Bacillus amyloliquefaciens strain GZY63]
ATGAATGATCATCGAGATGACGGCAGAAGCCGCGATCAGTCAGATCTTTCACATACGGAACAAAACAGAAATGAACAGCA
GCGGATCAGCCATCAGGAGCCCGAGCTGCTTGAAGAGCCCGTCTCGAAAGAAGCGGAAAACGAGACGGCGGCCGGTACGG
AATTTGAAAAAACGGCTGCCGTGAAAAAAGAAAAAAAACGGAGAGCTGCTTGGCTGAGCCCGGTTTTAGGCGGCATTATC
GGCGGCGGCCTCGTGCTTGGCATTGTGCCGAACCTGCCGAGTGAGCAGCATAAGACAGAAGCCGTTTCTGATACGAAACA
AGTTCAGTCTTCGAATTTTACGTCAACGCCTTTGAAAAATACCTCAAGCGTAGCGGATATGGTGGAAGATTTGGAGCCCG
CGATTGTGGGAGTGTCCAACTACCAAGCTTCGCAAAGCAGCCAGTTCGGACTTGACGGCGGTTCAAGCTCTGAAACGGAG
AGCGGCACGGGATCAGGCGTCATCTTCAAAAAAGACGGCGAAAAAGCGTACATCATTACAAACAACCATGTCGTAGAAGG
GGCGAACAAACTGTCGGTCACTCTTTACAATGGGAAAACCGAAACGGCAAAGCTTGTCGGAAAGGATGCCATCAGTGACT
TGGCCGTATTGGAAATCAGCTCGTCCAATGTCAAAAAAGCGGCCAGCTTCGGGGATTCCTCCAAGCTCCGCATTGCCGAT
AAAGTGATTGCCATCGGCAACCCGCTCGGCCAGCAGTTTTCCGGCACCGTCACACAAGGTGTCATCAGCGGGCTGAACAG
AACGGTAGACGCCGATACATCCCAAGGCACGGTGGAAATGAACGTGATTCAGACGGATGCGGCGATTAACCCCGGAAACA
GCGGCGGCCCGTTAATCAACTCAAGCGGCCAGGTCATCGGGATCAACAGCATGAAAGTCAGTGAAAACGGCGTGGAGTCA
CTCGGCTTTGCCATTCCGAGCAATGATGTAGAACCGATAGTCGACCAGCTCCTTGCAAAAGGAAAAGTCGAGCGCCCATT
TTTAGGTGTGCAGATGATTGACATGTCGCAAGTGCCGGAAACCTATCAGGAAAACACGCTCGGACTGTTCGGCGACCAGC
TGTCTAAGGGTGTTTACGTAAAAGAAGTGCAATCCGGCTCACCGGCTGCGAAAGCGGGCATTAAATCCAATGACGTCATT
GTACAATTGAACGGCAAAGATGTCGGCAGCAGCGCCGATATCAGACAGATCCTATATAACCAGCTGAAAATCGGCGATAA
AACGACTGTTCAAGTGCTCAGAAACGGAAGCAAAAAGACGCTGAACGTCACATTAACGAAACAAACCGAAAGCGCAAGCT
GA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(372-451)

Trypsin-like peptidase domain (Trypsin_2)

(164-308)

PDZ domain (PDZ_2)

(346-445)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

41.414

87.417

0.362