Detailed information NTG0768263

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QPX68_RS04505
• Genome accession: NZ_CP126696
• Coordinates: 874053..874958 (+)
• Length: 301 a.a.
• NCBI ID: WP_306797129.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain GZY63
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 869053..879958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPX68_RS04480	-	869171..869350 (+)	180	WP_032874179.1	FbpB family small basic protein	-
QPX68_RS04485	-	869353..871074 (+)	1722	WP_032874182.1	ABC transporter substrate-binding protein	-
QPX68_RS04490	-	871143..872099 (+)	957	WP_032874184.1	ABC transporter permease	-
QPX68_RS04495	opp4C	872112..873017 (+)	906	WP_032874186.1	oligopeptide ABC transporter permease	-
QPX68_RS04500	-	873014..874000 (+)	987	WP_032874189.1	ABC transporter ATP-binding protein	-
QPX68_RS04505	amiE	874053..874958 (+)	906	WP_306797129.1	ABC transporter ATP-binding protein	Regulator
QPX68_RS04510	katA	875030..876475 (-)	1446	WP_032874191.1	catalase KatA	-
QPX68_RS04515	-	876731..877666 (+)	936	WP_032874194.1	amidohydrolase family protein	-
QPX68_RS04520	-	877889..878656 (+)	768	WP_032874197.1	ABC transporter ATP-binding protein	-
QPX68_RS04525	-	878672..879661 (+)	990	WP_032874199.1	aliphatic sulfonate ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 301 a.a.
• Molecular weight: 33373.70 Da
• Isoelectric Point: 9.9890

>NTDB_id=768263 QPX68_RS04505 WP_306797129.1 874053..874958(+) (amiE) [Bacillus amyloliquefaciens strain GZY63]
MRKTRKNPVKAVDGVSFTIGKGEVFGLAGESGSGKSSIGKTILRLHEKTEGEVFFQGRDVFRMSRRELKTFRSEAQLIFQ
DPFSSLNPRRRIGEAIGEAMIEHQLAVKRNARDKAAEVLEACGLSANFIDRYPHEFSGGQRQRIVIARAMALKPQFIIMD
EPVAALDVSIQAQMINLFSSLQKQHGLSYLFISHDLSVVEHLCTKVAIMYLGTIVEYASKEELFSRPLHPYTKALLSAVP
VPDPGAKRERIILKGDIPSPSDPPSGCKFRTRCPAAKKICAEKSPALSEKGLHHFAACHFV

Nucleotide

• Length: 906 bp

>NTDB_id=768263 QPX68_RS04505 WP_306797129.1 874053..874958(+) (amiE) [Bacillus amyloliquefaciens strain GZY63]
ATGAGAAAGACCCGCAAAAATCCCGTAAAAGCAGTTGACGGTGTCAGTTTTACGATAGGAAAGGGAGAAGTGTTCGGCTT
AGCGGGAGAATCGGGCAGCGGAAAGTCATCAATCGGCAAGACCATTTTGAGGCTTCATGAAAAAACAGAGGGAGAGGTGT
TTTTTCAGGGGCGTGATGTGTTTCGGATGAGCCGGCGCGAGCTCAAAACTTTCAGATCGGAAGCGCAGCTCATTTTTCAA
GATCCGTTCAGTTCTTTAAATCCCCGGCGCCGGATCGGAGAAGCCATCGGTGAAGCGATGATCGAGCATCAATTGGCGGT
AAAGCGGAACGCGCGTGATAAAGCGGCGGAAGTTCTTGAAGCCTGCGGACTTTCCGCAAACTTTATCGATCGATATCCGC
ATGAATTTTCCGGAGGGCAGCGGCAGCGGATCGTGATTGCAAGAGCGATGGCGCTCAAGCCGCAATTTATCATTATGGAT
GAACCCGTGGCGGCGTTAGATGTCTCCATCCAGGCGCAGATGATCAATTTGTTCAGCAGCCTTCAAAAACAGCACGGGCT
GTCATATTTGTTCATTTCTCATGATTTAAGCGTGGTGGAGCACTTATGTACGAAGGTCGCCATTATGTATTTAGGGACGA
TTGTGGAATACGCGTCAAAGGAGGAGCTCTTTTCACGGCCGCTTCACCCTTATACGAAAGCGCTGTTATCAGCCGTGCCT
GTTCCTGATCCCGGAGCGAAAAGGGAGCGGATAATTTTAAAGGGTGATATACCGAGCCCCTCTGATCCGCCTTCAGGCTG
TAAATTCCGAACGAGATGCCCGGCAGCCAAGAAGATATGTGCTGAGAAAAGTCCGGCGCTGTCAGAAAAAGGGCTTCATC
ATTTTGCGGCATGCCACTTCGTGTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (215-280)

• ABC transporter (ABC_tran) (13-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	40.333	99.668	0.402
amiE	Streptococcus thermophilus LMD-9	40.333	99.668	0.402
amiE	Streptococcus salivarius strain HSISS4	40	99.668	0.399
oppD	Streptococcus mutans UA159	38.462	99.336	0.382
amiF	Streptococcus thermophilus LMD-9	47.131	81.063	0.382
amiF	Streptococcus thermophilus LMG 18311	47.131	81.063	0.382
amiF	Streptococcus salivarius strain HSISS4	46.341	81.728	0.379