Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QPX68_RS00225 Genome accession   NZ_CP126696
Coordinates   42349..43176 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain GZY63     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37349..48176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPX68_RS00200 - 38424..39857 (+) 1434 WP_032872170.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  QPX68_RS00205 tmk 39854..40492 (+) 639 WP_007615155.1 dTMP kinase -
  QPX68_RS00210 darA 40563..40892 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  QPX68_RS00215 - 40905..41345 (+) 441 WP_004264730.1 DUF327 family protein -
  QPX68_RS00220 holB 41357..42346 (+) 990 WP_032872173.1 DNA polymerase III subunit delta' -
  QPX68_RS00225 yaaT 42349..43176 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  QPX68_RS00230 yabA 43191..43550 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  QPX68_RS00235 - 43611..44354 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  QPX68_RS00240 - 44341..44640 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  QPX68_RS00245 rsmI 44615..45496 (+) 882 WP_032872176.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QPX68_RS00250 abrB 45546..45836 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=768232 QPX68_RS00225 WP_004264723.1 42349..43176(+) (yaaT) [Bacillus amyloliquefaciens strain GZY63]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=768232 QPX68_RS00225 WP_004264723.1 42349..43176(+) (yaaT) [Bacillus amyloliquefaciens strain GZY63]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAATT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTTACGGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATCTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967