Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QPR37_RS13220 Genome accession   NZ_CP126631
Coordinates   2691912..2692586 (-) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain 33-40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2686912..2697586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR37_RS13205 (QPR37_13205) vraG 2688095..2689984 (-) 1890 WP_000143625.1 ABC transporter permease VraG -
  QPR37_RS13210 (QPR37_13210) vraF 2689974..2690735 (-) 762 WP_141060093.1 ABC transporter ATP-binding protein VraF -
  QPR37_RS13215 (QPR37_13215) graS 2690879..2691919 (-) 1041 WP_001061261.1 histidine kinase GraS/ApsS -
  QPR37_RS13220 (QPR37_13220) braR 2691912..2692586 (-) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  QPR37_RS13225 (QPR37_13225) graX 2692602..2693525 (-) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  QPR37_RS13230 (QPR37_13230) - 2693638..2694144 (+) 507 WP_259354165.1 GNAT family N-acetyltransferase -
  QPR37_RS13235 (QPR37_13235) - 2694351..2694779 (-) 429 WP_000198501.1 hypothetical protein -
  QPR37_RS13240 (QPR37_13240) - 2695108..2696151 (-) 1044 WP_001030774.1 alpha/beta hydrolase -
  QPR37_RS13245 (QPR37_13245) - 2696302..2697369 (-) 1068 WP_063651823.1 hypothetical protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=768041 QPR37_RS13220 WP_001166496.1 2691912..2692586(-) (braR) [Staphylococcus aureus strain 33-40]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=768041 QPR37_RS13220 WP_001166496.1 2691912..2692586(-) (braR) [Staphylococcus aureus strain 33-40]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397