Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QPR37_RS07725 Genome accession   NZ_CP126631
Coordinates   1535472..1536212 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 33-40     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1530472..1541212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR37_RS07700 (QPR37_07700) yhaM 1530890..1531831 (+) 942 WP_141060418.1 3'-5' exoribonuclease YhaM -
  QPR37_RS07705 (QPR37_07705) - 1531952..1532914 (-) 963 WP_259378833.1 foldase protein PrsA -
  QPR37_RS07710 (QPR37_07710) - 1533119..1533676 (-) 558 WP_103204904.1 DUF3267 domain-containing protein -
  QPR37_RS07715 (QPR37_07715) - 1534409..1534774 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QPR37_RS07720 (QPR37_07720) - 1534916..1535338 (-) 423 WP_000004981.1 HIT family protein -
  QPR37_RS07725 (QPR37_07725) pptA 1535472..1536212 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  QPR37_RS07730 (QPR37_07730) - 1536205..1537428 (+) 1224 WP_285146619.1 ABC transporter permease -
  QPR37_RS07735 (QPR37_07735) traP 1537552..1538055 (-) 504 WP_000737980.1 signal transduction protein TRAP -
  QPR37_RS07740 (QPR37_07740) - 1538241..1538327 (+) 87 WP_031875110.1 hypothetical protein -
  QPR37_RS07745 (QPR37_07745) hemE 1538317..1539354 (+) 1038 WP_285146622.1 uroporphyrinogen decarboxylase -
  QPR37_RS07750 (QPR37_07750) hemH 1539412..1540335 (+) 924 WP_285146623.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=767984 QPR37_RS07725 WP_000216874.1 1535472..1536212(+) (pptA) [Staphylococcus aureus strain 33-40]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=767984 QPR37_RS07725 WP_000216874.1 1535472..1536212(+) (pptA) [Staphylococcus aureus strain 33-40]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGTGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCATATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACCGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545