Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QPL68_RS09125 Genome accession   NZ_CP126629
Coordinates   1889366..1890166 (-) Length   266 a.a.
NCBI ID   WP_063650948.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 35-42     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1884366..1895166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL68_RS09110 (QPL68_09110) - 1884858..1885664 (-) 807 WP_259378491.1 abortive infection family protein -
  QPL68_RS09115 (QPL68_09115) rlmH 1885974..1886453 (-) 480 WP_000704778.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QPL68_RS09120 (QPL68_09120) adsA 1886821..1889139 (-) 2319 WP_141060224.1 LPXTG-anchored adenosine synthase AdsA -
  QPL68_RS09125 (QPL68_09125) vicX 1889366..1890166 (-) 801 WP_063650948.1 MBL fold metallo-hydrolase Regulator
  QPL68_RS09130 (QPL68_09130) yycI 1890554..1891342 (-) 789 WP_045172593.1 two-component system regulatory protein YycI -
  QPL68_RS09135 (QPL68_09135) yycH 1891343..1892677 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  QPL68_RS09140 (QPL68_09140) walK 1892670..1894496 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30283.49 Da        Isoelectric Point: 6.3392

>NTDB_id=767938 QPL68_RS09125 WP_063650948.1 1889366..1890166(-) (vicX) [Staphylococcus aureus strain 35-42]
MSRLIRMSVLASGSAGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=767938 QPL68_RS09125 WP_063650948.1 1889366..1890166(-) (vicX) [Staphylococcus aureus strain 35-42]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTGCAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474