Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QPL68_RS00165 Genome accession   NZ_CP126629
Coordinates   27257..28075 (+) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain 35-42     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 22257..33075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL68_RS00135 (QPL68_00135) - 23528..23959 (+) 432 WP_285146596.1 Abi family protein -
  QPL68_RS00140 (QPL68_00140) - 24046..24465 (+) 420 WP_285146992.1 Abi family protein -
  QPL68_RS00145 (QPL68_00145) - 24607..24714 (-) 108 WP_107285502.1 hypothetical protein -
  QPL68_RS00150 (QPL68_00150) - 25041..25202 (+) 162 WP_001005407.1 SE1561 family protein -
  QPL68_RS00155 (QPL68_00155) - 25332..25847 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  QPL68_RS00160 (QPL68_00160) sgtB 26187..26996 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  QPL68_RS00165 (QPL68_00165) recX 27257..28075 (+) 819 WP_001124422.1 recombination regulator RecX Regulator
  QPL68_RS00170 (QPL68_00170) - 28053..28367 (+) 315 WP_000435806.1 YfhH family protein -
  QPL68_RS00175 (QPL68_00175) - 28382..29899 (+) 1518 WP_259378801.1 ABC transporter ATP-binding protein -
  QPL68_RS00180 (QPL68_00180) - 29908..30744 (+) 837 WP_141060378.1 hypothetical protein -
  QPL68_RS00185 (QPL68_00185) - 31005..31982 (-) 978 WP_285146602.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=767869 QPL68_RS00165 WP_001124422.1 27257..28075(+) (recX) [Staphylococcus aureus strain 35-42]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=767869 QPL68_RS00165 WP_001124422.1 27257..28075(+) (recX) [Staphylococcus aureus strain 35-42]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996