Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   O8I26_RS14480 Genome accession   NZ_CP115004
Coordinates   2942640..2943266 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain CUVET22-969     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2937640..2948266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O8I26_RS14465 (O8I26_14455) helD 2937879..2939933 (-) 2055 WP_032608969.1 DNA helicase IV -
  O8I26_RS14470 (O8I26_14460) - 2940056..2940502 (+) 447 WP_003858149.1 YccF domain-containing protein -
  O8I26_RS14475 (O8I26_14465) yccS 2940521..2942683 (+) 2163 WP_032608968.1 YccS family putative transporter -
  O8I26_RS14480 (O8I26_14470) sxy/tfoX 2942640..2943266 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  O8I26_RS14485 (O8I26_14475) sulA 2943484..2943993 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  O8I26_RS14490 (O8I26_14480) ompA 2944350..2945402 (+) 1053 WP_017694761.1 porin OmpA -
  O8I26_RS14495 (O8I26_14485) matP 2945468..2945920 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  O8I26_RS14500 (O8I26_14490) - 2946107..2947867 (+) 1761 WP_032608967.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=767800 O8I26_RS14480 WP_023315767.1 2942640..2943266(-) (sxy/tfoX) [Enterobacter hormaechei strain CUVET22-969]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=767800 O8I26_RS14480 WP_023315767.1 2942640..2943266(-) (sxy/tfoX) [Enterobacter hormaechei strain CUVET22-969]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572