Detailed information NTG0767792

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F0312_RS00970
• Genome accession: NZ_CP126614
• Coordinates: 201151..202134 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Ec1115
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 196151..207134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0312_RS00955 (F0312_000955)	dppA	197294..198901 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
F0312_RS00960 (F0312_000960)	dppB	199209..200228 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F0312_RS00965 (F0312_000965)	dppC	200238..201140 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F0312_RS00970 (F0312_000970)	amiE	201151..202134 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
F0312_RS00975 (F0312_000975)	dppF	202131..203135 (+)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F0312_RS00980 (F0312_000980)	yhjV	203165..204436 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
F0312_RS00985 (F0312_000985)	ldrD	204912..205019 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F0312_RS00990 (F0312_000990)	bcsG	205106..206785 (-)	1680	Protein_194	cellulose biosynthesis protein BcsG	-
F0312_RS00995 (F0312_000995)	bcsF	206782..206973 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=767792 F0312_RS00970 WP_001196486.1 201151..202134(+) (amiE) [Escherichia coli strain Ec1115]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=767792 F0312_RS00970 WP_001196486.1 201151..202134(+) (amiE) [Escherichia coli strain Ec1115]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404