Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   O8I27_RS07720 Genome accession   NZ_CP115000
Coordinates   1648966..1649592 (+) Length   208 a.a.
NCBI ID   WP_063135274.1    Uniprot ID   -
Organism   Enterobacter hormaechei strain CUVET22-793     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1643966..1654592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O8I27_RS07700 (O8I27_07695) - 1644365..1646125 (-) 1761 WP_033487273.1 AAA family ATPase -
  O8I27_RS07705 (O8I27_07700) matP 1646312..1646764 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  O8I27_RS07710 (O8I27_07705) ompA 1646830..1647882 (-) 1053 WP_017694761.1 porin OmpA -
  O8I27_RS07715 (O8I27_07710) sulA 1648239..1648748 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  O8I27_RS07720 (O8I27_07715) sxy/tfoX 1648966..1649592 (+) 627 WP_063135274.1 TfoX/Sxy family DNA transformation protein Regulator
  O8I27_RS07725 (O8I27_07720) yccS 1649549..1651711 (-) 2163 WP_015570895.1 YccS family putative transporter -
  O8I27_RS07730 (O8I27_07725) - 1651730..1652176 (-) 447 WP_015570894.1 YccF domain-containing protein -
  O8I27_RS07735 (O8I27_07730) helD 1652299..1654353 (+) 2055 WP_063135273.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.6332

>NTDB_id=767769 O8I27_RS07720 WP_063135274.1 1648966..1649592(+) (sxy/tfoX) [Enterobacter hormaechei strain CUVET22-793]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRASEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=767769 O8I27_RS07720 WP_063135274.1 1648966..1649592(+) (sxy/tfoX) [Enterobacter hormaechei strain CUVET22-793]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTCTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.416

97.115

0.567