Detailed information NTG0767712

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F0314_RS00900
• Genome accession: NZ_CP126602
• Coordinates: 189247..190230 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain Ec1117
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 184247..195230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0314_RS00885 (F0314_000885)	dppA	185547..187154 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
F0314_RS00890 (F0314_000890)	dppB	187305..188324 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
F0314_RS00895 (F0314_000895)	dppC	188334..189236 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F0314_RS00900 (F0314_000900)	amiE	189247..190230 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
F0314_RS00905 (F0314_000905)	dppF	190227..191231 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F0314_RS00910 (F0314_000910)	yhjV	191261..192532 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
F0314_RS00915 (F0314_000915)	-	193008..193115 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F0314_RS00920 (F0314_000920)	-	193491..193598 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F0314_RS00925 (F0314_000925)	-	193974..194081 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F0314_RS00930 (F0314_000930)	-	194457..194564 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=767712 F0314_RS00900 WP_001196496.1 189247..190230(+) (amiE) [Escherichia coli strain Ec1117]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=767712 F0314_RS00900 WP_001196496.1 189247..190230(+) (amiE) [Escherichia coli strain Ec1117]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401