Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   O8I29_RS08450 Genome accession   NZ_CP114979
Coordinates   1738506..1739132 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain CUVET18-121     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1733506..1744132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O8I29_RS08430 (O8I29_08430) - 1733905..1735665 (-) 1761 WP_032657964.1 AAA family ATPase -
  O8I29_RS08435 (O8I29_08435) matP 1735852..1736304 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  O8I29_RS08440 (O8I29_08440) ompA 1736370..1737422 (-) 1053 WP_003858156.1 porin OmpA -
  O8I29_RS08445 (O8I29_08445) sulA 1737779..1738288 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  O8I29_RS08450 (O8I29_08450) sxy/tfoX 1738506..1739132 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  O8I29_RS08455 (O8I29_08455) yccS 1739089..1741251 (-) 2163 WP_022650744.1 YccS family putative transporter -
  O8I29_RS08460 (O8I29_08460) - 1741270..1741716 (-) 447 WP_003858149.1 YccF domain-containing protein -
  O8I29_RS08465 (O8I29_08465) helD 1741839..1743893 (+) 2055 WP_032657966.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=767681 O8I29_RS08450 WP_023315767.1 1738506..1739132(+) (sxy/tfoX) [Enterobacter hormaechei strain CUVET18-121]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=767681 O8I29_RS08450 WP_023315767.1 1738506..1739132(+) (sxy/tfoX) [Enterobacter hormaechei strain CUVET18-121]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572