Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   O8I58_RS06465 Genome accession   NZ_CP114978
Coordinates   1469295..1469696 (-) Length   133 a.a.
NCBI ID   WP_298321578.1    Uniprot ID   -
Organism   MAG: Pseudoxanthomonas sp. isolate Chal_Metagen_Bin2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464295..1474696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O8I58_RS06455 (O8I58_06455) - 1466564..1468597 (-) 2034 WP_298321577.1 methyl-accepting chemotaxis protein -
  O8I58_RS06460 (O8I58_06460) - 1468675..1469205 (-) 531 WP_298322803.1 chemotaxis protein CheW -
  O8I58_RS06465 (O8I58_06465) pilG 1469295..1469696 (-) 402 WP_298321578.1 twitching motility response regulator PilG Regulator
  O8I58_RS06470 (O8I58_06470) gshB 1469888..1470838 (+) 951 WP_298321579.1 glutathione synthase -
  O8I58_RS06475 (O8I58_06475) - 1470969..1471841 (+) 873 WP_298321580.1 energy transducer TonB -
  O8I58_RS06480 (O8I58_06480) tsaB 1471902..1472613 (-) 712 Protein_1272 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  O8I58_RS06485 (O8I58_06485) sucD 1472881..1473757 (-) 877 Protein_1273 succinate--CoA ligase subunit alpha -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14739.96 Da        Isoelectric Point: 6.9527

>NTDB_id=767662 O8I58_RS06465 WP_298321578.1 1469295..1469696(-) (pilG) [MAG: Pseudoxanthomonas sp. isolate Chal_Metagen_Bin2]
MTDNDSQAGSFGGLRVMVIDDSKTIRRTAETLLKREGCDVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKTTPVIMLSSKDGLFDKARGRIVGSQQYLTKPFTREELLDAIRTHVAA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=767662 O8I58_RS06465 WP_298321578.1 1469295..1469696(-) (pilG) [MAG: Pseudoxanthomonas sp. isolate Chal_Metagen_Bin2]
ATGACAGACAATGACAGCCAGGCCGGCAGTTTCGGCGGCCTGCGGGTGATGGTGATCGATGATTCGAAGACCATCCGGCG
CACGGCCGAAACCCTGCTCAAGCGCGAGGGGTGCGACGTCGTGACCGCGACGGATGGATTCGAGGCGCTGGCCAAGATTG
CCGACCAGCAGCCACAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGATGGATATCAGACCTGCGCGCTGATCAAG
AACAACCAGGTCTTCAAGACCACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCGCGTGGCCGCAT
CGTCGGCTCCCAGCAGTACCTCACCAAGCCATTCACGCGTGAGGAACTGCTCGACGCCATCCGTACCCACGTGGCTGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.233

0.692