Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   O6U12_RS11065 Genome accession   NZ_CP114899
Coordinates   2035110..2036231 (-) Length   373 a.a.
NCBI ID   WP_250540020.1    Uniprot ID   -
Organism   Bacillus subtilis strain     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2030110..2041231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6U12_RS11040 (O6U12_11040) cwlQ 2030252..2030986 (+) 735 WP_017695685.1 bifunctional muramidase/murein lytic transglycosylase -
  O6U12_RS11045 (O6U12_11045) bhbI 2031238..2031636 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  O6U12_RS11050 (O6U12_11050) spxH 2031633..2032532 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  O6U12_RS11055 (O6U12_11055) - 2032846..2033013 (+) 168 WP_003244944.1 hypothetical protein -
  O6U12_RS11060 (O6U12_11060) pepF 2033051..2034880 (-) 1830 WP_171518460.1 oligoendopeptidase F -
  O6U12_RS11065 (O6U12_11065) coiA 2035110..2036231 (-) 1122 WP_250540020.1 competence protein CoiA Machinery gene
  O6U12_RS11070 (O6U12_11070) - 2036305..2036427 (+) 123 WP_003245684.1 hypothetical protein -
  O6U12_RS11075 (O6U12_11075) mecA 2036422..2037078 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  O6U12_RS11080 (O6U12_11080) - 2037045..2037185 (-) 141 WP_119122854.1 hypothetical protein -
  O6U12_RS11085 (O6U12_11085) yjbE 2037355..2038011 (+) 657 WP_003232944.1 TerC family protein -
  O6U12_RS11090 (O6U12_11090) spx 2038266..2038661 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  O6U12_RS11095 (O6U12_11095) yjbC 2038842..2039420 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  O6U12_RS11100 (O6U12_11100) yjbB 2039585..2040802 (-) 1218 WP_080031063.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43805.87 Da        Isoelectric Point: 10.0622

>NTDB_id=767593 O6U12_RS11065 WP_250540020.1 2035110..2036231(-) (coiA) [Bacillus subtilis strain]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=767593 O6U12_RS11065 WP_250540020.1 2035110..2036231(-) (coiA) [Bacillus subtilis strain]
CTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACACCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

100

0.987