Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QPK28_RS21970 Genome accession   NZ_CP126576
Coordinates   4205631..4206338 (-) Length   235 a.a.
NCBI ID   WP_003177869.1    Uniprot ID   A0AA90EY57
Organism   Bacillus licheniformis strain CQMB003     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4200631..4211338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS21950 - 4200674..4201762 (-) 1089 WP_003177863.1 acyltransferase family protein -
  QPK28_RS21955 - 4201910..4203796 (-) 1887 WP_080618563.1 ABC transporter permease -
  QPK28_RS21960 - 4203771..4204535 (-) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  QPK28_RS21965 - 4204627..4205634 (-) 1008 WP_003177867.1 sensor histidine kinase -
  QPK28_RS21970 braR 4205631..4206338 (-) 708 WP_003177869.1 response regulator transcription factor Regulator
  QPK28_RS21975 - 4206521..4206892 (+) 372 WP_095646347.1 YxeA family protein -
  QPK28_RS21980 - 4206921..4208606 (-) 1686 WP_003177874.1 methyl-accepting chemotaxis protein -
  QPK28_RS21985 - 4208761..4210185 (-) 1425 WP_003177876.1 sodium:alanine symporter family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27044.93 Da        Isoelectric Point: 4.9777

>NTDB_id=767547 QPK28_RS21970 WP_003177869.1 4205631..4206338(-) (braR) [Bacillus licheniformis strain CQMB003]
MQKVMIVEDDPKIADLLKSHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=767547 QPK28_RS21970 WP_003177869.1 4205631..4206338(-) (braR) [Bacillus licheniformis strain CQMB003]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATCGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA90EY57

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.91

94.894

0.379