NTDB

Overview

Name	coiA	Type	Machinery gene
Locus tag	QPK28_RS06265	Genome accession	NZ_CP126576
Coordinates	1255524..1256672 (+)	Length	382 a.a.
NCBI ID	WP_009328825.1	Uniprot ID	Q65LB1
Organism	Bacillus licheniformis strain CQMB003
Function	homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake

Genomic Context

Location: 1250524..1261672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPK28_RS06245	-	1251072..1251527 (+)	456	WP_009328829.1	tripartite tricarboxylate transporter TctB family protein	-
QPK28_RS06250	-	1251550..1253052 (+)	1503	WP_017474220.1	tripartite tricarboxylate transporter permease	-
QPK28_RS06255	-	1253072..1253788 (-)	717	WP_009328827.1	response regulator	-
QPK28_RS06260	-	1253811..1255406 (-)	1596	WP_009328826.1	sensor histidine kinase	-
QPK28_RS06265	coiA	1255524..1256672 (+)	1149	WP_009328825.1	competence protein CoiA family protein	Machinery gene
QPK28_RS06270	pepF	1256885..1258714 (+)	1830	WP_282334326.1	oligoendopeptidase F	Regulator
QPK28_RS06275	-	1258771..1258938 (-)	168	WP_009328823.1	hypothetical protein	-
QPK28_RS06280	spxH	1259350..1260252 (-)	903	WP_009328822.1	protease adaptor protein SpxH	-
QPK28_RS06285	-	1260249..1260647 (-)	399	WP_025808315.1	thiol management oxidoreductase	-
QPK28_RS06290	-	1260929..1261582 (-)	654	WP_009328821.1	lytic transglycosylase domain-containing protein	-

Sequence

Protein

Download Length: 382 a.a. Molecular weight: 44647.01 Da Isoelectric Point: 9.9815

                                >NTDB_id=767449 QPK28_RS06265 WP_009328825.1 1255524..1256672(+) (coiA) [Bacillus licheniformis strain CQMB003]

MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY

EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ

LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLIPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF

RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG

KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Nucleotide

Download Length: 1149 bp

                                >NTDB_id=767449 QPK28_RS06265 WP_009328825.1 1255524..1256672(+) (coiA) [Bacillus licheniformis strain CQMB003]

ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG

AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG

CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC

GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT

GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG

GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG

CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC

TTTCATCATCCTCGAACACCTCATTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG

CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT

CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT

CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT

ACCTTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC

AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA

AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA

AAAGGGATGAACATTATTTTTCCGAATGA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-312)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	Q65LB1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
coiA	Bacillus subtilis subsp. subtilis str. 168	42.308	95.288	0.403

Detailed information NTG0767449