Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   LL303_RS11520 Genome accession   NZ_CP126467
Coordinates   2252831..2253601 (-) Length   256 a.a.
NCBI ID   WP_004254655.1    Uniprot ID   Q9CE51
Organism   Lactococcus lactis subsp. lactis strain 303     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2247831..2258601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL303_RS11490 (LL303_11460) - 2248462..2248629 (-) 168 WP_004254670.1 hypothetical protein -
  LL303_RS11495 (LL303_11465) - 2248766..2249689 (-) 924 WP_004254664.1 peptidase U32 family protein -
  LL303_RS11500 (LL303_11470) - 2249910..2250191 (+) 282 WP_095348340.1 DUF3270 family protein -
  LL303_RS11505 (LL303_11475) - 2250214..2251035 (-) 822 WP_004254659.1 putative RNA methyltransferase -
  LL303_RS11510 (LL303_11480) - 2251153..2251779 (+) 627 WP_004254657.1 copper homeostasis protein CutC -
  LL303_RS11515 (LL303_11485) - 2251819..2252838 (-) 1020 WP_004254656.1 ABC transporter permease -
  LL303_RS11520 (LL303_11490) pptA 2252831..2253601 (-) 771 WP_004254655.1 ABC transporter ATP-binding protein Regulator
  LL303_RS11525 (LL303_11495) - 2253620..2255374 (-) 1755 WP_095345433.1 glycerophosphoryl diester phosphodiesterase membrane domain-containing protein -
  LL303_RS11530 (LL303_11500) - 2255703..2256104 (+) 402 WP_004254651.1 HIT family protein -
  LL303_RS11535 (LL303_11505) - 2256117..2256338 (+) 222 WP_010906257.1 hypothetical protein -
  LL303_RS11540 (LL303_11510) - 2256350..2256694 (-) 345 WP_047686108.1 hypothetical protein -
  LL303_RS11545 (LL303_11515) rplA 2256773..2257462 (-) 690 WP_004254644.1 50S ribosomal protein L1 -
  LL303_RS11550 (LL303_11520) rplK 2257758..2258183 (-) 426 WP_004254643.1 50S ribosomal protein L11 -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 28472.99 Da        Isoelectric Point: 4.5320

>NTDB_id=767381 LL303_RS11520 WP_004254655.1 2252831..2253601(-) (pptA) [Lactococcus lactis subsp. lactis strain 303]
MLKVTNLTGGYLGHPVLKDLNFEIKEGELVGLIGLNGAGKSTTIQEIIGLLTPYSGQIELDGLTLQQDLEGYRRKIGFIP
ETPSLYEELTLREHIEVTALAYGISVDLAFERAEKLLETFRLSDKLDWFPVNFSKGMKQKVMIICAFLVEPSLYIVDEPF
MGLDPLAIQDLIDLMIDMKKSGSSILMSTHILSTAEKFCDKFIVLHEGQVVAFGTVEELRTQFNQPKASLDEIYLALTKG
NIPNSKEVVEAGKSNE

Nucleotide


Download         Length: 771 bp        

>NTDB_id=767381 LL303_RS11520 WP_004254655.1 2252831..2253601(-) (pptA) [Lactococcus lactis subsp. lactis strain 303]
ATGTTAAAAGTAACAAATCTAACAGGTGGCTATTTGGGGCATCCTGTCTTAAAAGACCTTAATTTTGAAATTAAAGAAGG
AGAGTTAGTTGGACTCATTGGTTTAAATGGTGCAGGAAAATCGACGACAATTCAAGAAATTATTGGACTTTTGACTCCTT
ATTCTGGACAAATTGAATTAGACGGCTTAACTTTACAACAAGATTTAGAAGGCTATCGTAGAAAAATTGGTTTCATTCCA
GAAACACCAAGTTTGTATGAAGAATTGACTTTGCGTGAACATATTGAAGTGACAGCTTTAGCTTACGGGATTTCTGTTGA
CTTGGCTTTTGAACGTGCTGAAAAATTATTAGAAACTTTCCGCTTGAGTGATAAATTAGATTGGTTCCCTGTGAATTTTT
CAAAAGGGATGAAACAAAAAGTGATGATTATCTGCGCATTCTTAGTGGAACCTTCTCTCTATATTGTTGATGAACCTTTT
ATGGGACTTGATCCGCTTGCGATTCAGGATTTGATTGACTTGATGATTGACATGAAAAAATCAGGAAGTTCGATTTTAAT
GAGTACACATATCTTGTCCACAGCTGAAAAATTCTGTGATAAATTTATTGTTTTGCATGAAGGTCAAGTTGTTGCTTTTG
GAACAGTAGAAGAATTACGGACTCAATTTAATCAGCCTAAGGCAAGTTTAGATGAAATTTATCTTGCCTTAACAAAAGGA
AATATTCCAAACTCTAAAGAAGTTGTAGAGGCAGGAAAGTCAAATGAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CE51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

67.355

94.531

0.637
  pptA Streptococcus thermophilus LMD-9

66.942

94.531

0.633