Detailed information NTG0767351

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: O6R09_RS08735
• Genome accession: NZ_CP114883
• Coordinates: 1723450..1725891 (-)
• Length: 813 a.a.
• NCBI ID: WP_154454916.1
• Uniprot ID: -
• Organism: Streptococcus alactolyticus strain LGM
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1718450..1730891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O6R09_RS08715 (O6R09_08715)	-	1719317..1720135 (+)	819	WP_269725625.1	hypothetical protein	-
O6R09_RS08720 (O6R09_08720)	-	1720154..1721428 (+)	1275	WP_269725626.1	toxic anion resistance protein	-
O6R09_RS08725 (O6R09_08725)	hslO	1721542..1722408 (+)	867	WP_269725627.1	Hsp33 family molecular chaperone HslO	-
O6R09_RS08730 (O6R09_08730)	dusB	1722401..1723378 (+)	978	WP_269725628.1	tRNA dihydrouridine synthase DusB	-
O6R09_RS08735 (O6R09_08735)	clpC	1723450..1725891 (-)	2442	WP_154454916.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
O6R09_RS08740 (O6R09_08740)	-	1725888..1726349 (-)	462	WP_168261183.1	CtsR family transcriptional regulator	-
O6R09_RS08745 (O6R09_08745)	-	1726583..1727047 (+)	465	WP_154454914.1	COG2426 family protein	-
O6R09_RS08750 (O6R09_08750)	tsf	1727180..1728217 (-)	1038	WP_154454913.1	translation elongation factor Ts	-
O6R09_RS08755 (O6R09_08755)	rpsB	1728324..1729091 (-)	768	WP_154454912.1	30S ribosomal protein S2	-
O6R09_RS08760 (O6R09_08760)	-	1729633..1730397 (-)	765	WP_328230341.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 90400.78 Da
• Isoelectric Point: 5.4643

>NTDB_id=767351 O6R09_RS08735 WP_154454916.1 1723450..1725891(-) (clpC) [Streptococcus alactolyticus strain LGM]
MSEYSLKMQEVFNVAQYQAARFESPYLESWHVLLAMVAVHDSVAGLTFAEYQSRIPYEEYEAAAVLALNKSPLERVEQVR
FVEQSKALSDVLDFAQEISVVTDDIEVGTEHVLYAMLLNLDLFATRLLEVAGFKQKEDGDSVRLIDLRKSLARHAGFTKE
NIKAIHEFRKPKKASMGGAFSDMMKPQSTAGELSDFTRDLTEMARQGKLEPVIGRDKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVTISDA
AVLTAVKSAHRYLTSKNLPDSAIDLLDEASATVQSLVKKEAPAMLTPADQAILDGDFALATSLLKKADTKVKRKPTPVTE
DDIMATLSRLSGIPVEKMTQADSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGVRDMAHDYEAMQKRIMEELKKTYRPEFINRIDEKVVFHS
LTQDNMREVVKIMVKPLIATLAEKGVTLKFQPSALKYLAELGYDPEMGARPLRRTLQDKVEDKLSELILSDELANGDTLK
IGVAKGQLKFDIV

Nucleotide

• Length: 2442 bp

>NTDB_id=767351 O6R09_RS08735 WP_154454916.1 1723450..1725891(-) (clpC) [Streptococcus alactolyticus strain LGM]
ATGAGTGAGTACTCGTTAAAAATGCAGGAGGTTTTCAATGTCGCGCAGTATCAAGCAGCACGTTTTGAAAGCCCCTATTT
AGAGAGTTGGCATGTGCTATTGGCCATGGTAGCTGTACATGATTCAGTAGCAGGTCTTACCTTTGCAGAATACCAAAGTC
GTATTCCTTATGAAGAATACGAAGCAGCGGCTGTTTTGGCACTAAATAAGTCACCGTTGGAACGTGTTGAGCAGGTGCGT
TTTGTGGAACAGTCAAAAGCGCTTAGCGATGTTCTTGACTTTGCACAAGAGATTAGTGTTGTGACGGACGACATTGAAGT
TGGGACAGAGCACGTACTTTATGCCATGCTGTTAAACTTGGATTTGTTTGCGACACGTTTATTGGAAGTGGCTGGTTTCA
AGCAGAAAGAAGACGGCGATTCGGTTCGTTTGATTGATTTGCGTAAGAGCTTGGCACGTCATGCGGGCTTTACCAAGGAA
AATATCAAAGCCATTCATGAGTTTCGTAAACCGAAAAAAGCAAGTATGGGCGGTGCTTTTTCAGACATGATGAAACCGCA
ATCCACTGCAGGAGAACTGTCTGATTTTACGCGTGATTTGACGGAAATGGCACGTCAAGGAAAGCTTGAGCCCGTTATCG
GACGTGACAAAGAAATTTCACGAATGGTGCAAGTGCTTAGCCGTAAAACTAAGAACAATCCTGTCTTGGTGGGAGAAGCT
GGTGTTGGTAAGACAGCTTTGGCTTATGGTTTGGCGCAACGCATTGTCAATGGAGCGATTCCATATGAATTGCAAGATAT
GCGTGTCTTGGAATTGGACATGATGAGTGTGGTTGCTGGCACGCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATCAAA
TCATTTCAGATATTGAAGAAGATGGTCATATTATCTTGTTTATTGATGAAGTGCACACGATTATGGGGTCAGGGTCAGGC
ATTGACAGCACCTTAGATGCGGCAAATATCCTAAAACCTGCCTTGGCGCGTGGTACCTTGCACATGGTGGGTGCAACAAC
ACAAGAAGAATACCAAAAACACCTTGAAAAAGATGCTGCGCTTTCTCGTCGTTTTGCGAAAATCACGATTGAAGAGCCAA
GTGTTGAAGATGCTTATCAGATTTTGTTGGGCTTGAAGAAATCTTATGAGGACTTCCATAATGTTACCATTTCAGATGCC
GCTGTTTTGACAGCTGTTAAATCTGCTCACCGTTATTTGACCAGCAAAAACCTACCTGATTCTGCTATTGATTTGCTGGA
TGAAGCCAGTGCAACCGTGCAAAGTTTAGTTAAGAAAGAAGCGCCAGCGATGTTGACGCCTGCTGACCAAGCCATTTTAG
ATGGCGATTTTGCTTTAGCGACAAGCTTGCTCAAAAAGGCAGATACCAAGGTGAAACGTAAACCAACACCTGTCACAGAA
GATGATATTATGGCGACTTTAAGCCGTTTGTCAGGTATTCCTGTGGAAAAAATGACCCAAGCCGACAGCAAGAAATACCT
GACCCTTGAAAAAGAATTGCACAAGCGTGTTATTGGGCAAGACGCGGCCATTTCAGCAATTAGCCGTGCAATTCGCCGTA
ATCAAGCAGGTATTCGCACAGGCAAACGTCCAATTGGTTCCTTCATGTTCCTTGGTCCAACTGGTGTTGGTAAAACTGAA
TTGGCGAAAGCCCTTGCAGAATTGCTCTTTGATGACGAATCAGCTCTTATCCGCTTTGATATGTCGGAATACATGGAAAA
ATTTGCGGCGAGCCGTCTTAACGGTGCCCCTCCAGGCTATGTCGGCTATGAAGAAGGCGGCGAATTGACTGAGAAAGTTC
GTAACAAACCGTATTCAGTGCTTTTGTTTGACGAGGTGGAAAAAGCTCACCCTGACATTTTCAATGTGCTTTTGCAAGTT
TTGGATGACGGGGTTTTGACAGACAGTCGTGGTCGAAAAGTGGATTTCTCAAACACCATTATCATCATGACCTCAAACCT
TGGTGCGACAGCTTTGCGCGATGAAAAGACTGTTGGTTTTGGAGTGCGTGATATGGCACATGATTACGAAGCCATGCAAA
AACGCATCATGGAAGAGCTCAAAAAAACTTACCGTCCTGAATTTATCAACCGTATTGATGAAAAAGTGGTCTTCCATAGC
TTGACGCAAGACAATATGCGTGAAGTTGTGAAAATCATGGTGAAACCATTGATTGCAACTCTGGCTGAAAAAGGTGTGAC
CTTGAAATTCCAACCATCAGCCCTTAAATATTTGGCTGAATTGGGTTATGACCCTGAAATGGGAGCACGTCCGCTCCGCC
GAACCTTGCAAGACAAGGTGGAAGATAAGCTATCAGAACTCATCTTATCAGACGAATTAGCAAATGGTGATACTCTAAAA
ATCGGGGTTGCCAAAGGCCAGCTGAAATTTGATATTGTTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (721-801)

• ATPase family associated with various cellular activities (AAA) (AAA) (235-366)

• AAA domain (Cdc48 subfamily) (AAA_2) (543-714)

• AAA lid domain (AAA_lid_9) (374-440)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	76.63	100	0.766
clpC	Streptococcus thermophilus LMD-9	73.317	100	0.737
clpC	Streptococcus thermophilus LMG 18311	73.317	100	0.737
clpC	Streptococcus pneumoniae TIGR4	68.512	100	0.685
clpC	Streptococcus pneumoniae Rx1	68.512	100	0.685
clpC	Streptococcus pneumoniae D39	68.512	100	0.685
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	48.868	100	0.504
clpC	Bacillus subtilis subsp. subtilis str. 168	43.803	100	0.448
clpE	Streptococcus mutans UA159	47.981	76.138	0.365