Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   O6R09_RS02385 Genome accession   NZ_CP114883
Coordinates   429458..430546 (+) Length   362 a.a.
NCBI ID   WP_154454476.1    Uniprot ID   -
Organism   Streptococcus alactolyticus strain LGM     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 424458..435546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6R09_RS02350 (O6R09_02350) - 424841..425122 (-) 282 WP_235280864.1 hypothetical protein -
  O6R09_RS02355 (O6R09_02355) - 425508..425771 (+) 264 WP_269725726.1 hypothetical protein -
  O6R09_RS02360 (O6R09_02360) - 425711..426004 (+) 294 WP_235281318.1 hypothetical protein -
  O6R09_RS02365 (O6R09_02365) asnA 426379..427371 (+) 993 WP_235281308.1 aspartate--ammonia ligase -
  O6R09_RS02370 (O6R09_02370) - 427431..428294 (-) 864 WP_269725727.1 hypothetical protein -
  O6R09_RS02375 (O6R09_02375) rsmD 428421..428960 (+) 540 WP_154454478.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  O6R09_RS02380 (O6R09_02380) coaD 428983..429480 (+) 498 WP_154454477.1 pantetheine-phosphate adenylyltransferase -
  O6R09_RS02385 (O6R09_02385) sepM 429458..430546 (+) 1089 WP_154454476.1 SepM family pheromone-processing serine protease Regulator
  O6R09_RS02390 (O6R09_02390) - 430688..430927 (+) 240 WP_154454475.1 DUF3923 family protein -
  O6R09_RS02395 (O6R09_02395) - 431145..431720 (+) 576 WP_154454474.1 YutD family protein -
  O6R09_RS02400 (O6R09_02400) rlmN 431742..432854 (+) 1113 WP_154454473.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  O6R09_RS02405 (O6R09_02405) - 432847..433359 (+) 513 WP_154454472.1 VanZ family protein -
  O6R09_RS02410 (O6R09_02410) - 433446..434603 (+) 1158 WP_154454471.1 permease -

Sequence


Protein


Download         Length: 362 a.a.        Molecular weight: 39244.92 Da        Isoelectric Point: 4.3395

>NTDB_id=767322 O6R09_RS02385 WP_154454476.1 429458..430546(+) (sepM) [Streptococcus alactolyticus strain LGM]
MTKNNGFKKTLGKVGHFLKRFKWWIVGVVGVLFLLFSLFYPLNYYIEMPGGAYDVRSVLTVNNKEDDEEGSYNFVAVSVS
QATLAQLVYAWLTPHTEISTAKETTGGYSNEDYLRINDYYMQTSQNTATYEALTLAGQPVTLDYEGVYVLNVSDNSTFKG
ILNIADTVTGINGQTFNSSAELMAYVADLDLGSEVTVQYTSDGKAKEATGKIIELSNGKNGIGIGLVDHTKVSSDIPVDF
HTSGVGGPSAGLMFTLDIYDQLTQENLRKGRKIAGTGTIESDGSVGDIGGAALKVISAAKSGADIFFVPNNPVDEETLKQ
DPDAKTNYEEAVEAAKSIDTDMKIVPVTTVQEAIDYLRDTDK

Nucleotide


Download         Length: 1089 bp        

>NTDB_id=767322 O6R09_RS02385 WP_154454476.1 429458..430546(+) (sepM) [Streptococcus alactolyticus strain LGM]
ATGACAAAAAACAATGGCTTTAAGAAGACACTCGGCAAAGTCGGTCATTTTTTGAAGCGTTTTAAGTGGTGGATTGTAGG
TGTTGTGGGAGTTCTTTTTCTCCTGTTTAGCCTCTTTTACCCGCTGAATTACTATATCGAAATGCCTGGTGGTGCCTATG
ATGTGCGCAGTGTTCTGACGGTTAATAATAAAGAGGATGACGAAGAAGGGTCTTACAATTTTGTAGCGGTATCGGTCAGT
CAGGCGACCTTGGCCCAGCTGGTTTATGCTTGGTTGACCCCGCATACCGAGATTTCCACAGCTAAGGAAACCACAGGTGG
TTACAGTAATGAGGATTACCTGCGTATCAATGATTATTATATGCAGACCTCACAAAATACAGCTACTTATGAAGCACTGA
CTTTGGCTGGCCAACCTGTTACTCTTGATTATGAAGGGGTTTATGTCCTAAACGTCAGCGATAATTCAACCTTCAAGGGC
ATTTTAAACATCGCCGATACTGTAACTGGCATTAACGGTCAGACCTTTAACAGTTCGGCAGAGCTGATGGCTTATGTGGC
TGATTTGGATTTGGGTTCTGAAGTAACGGTTCAATACACTTCAGACGGCAAGGCCAAAGAAGCAACGGGTAAAATCATTG
AATTGTCAAATGGTAAAAATGGAATTGGTATTGGTTTGGTGGACCATACCAAAGTATCGTCAGACATTCCTGTTGACTTT
CACACCAGTGGTGTCGGCGGTCCAAGTGCTGGTTTGATGTTCACCCTTGATATTTACGACCAATTGACCCAAGAAAACCT
TCGTAAAGGGCGCAAGATTGCTGGAACAGGAACCATTGAAAGTGATGGTTCTGTGGGCGACATCGGTGGAGCGGCTCTTA
AGGTTATCTCTGCGGCAAAATCAGGTGCGGATATTTTCTTCGTGCCAAATAACCCGGTAGATGAGGAAACCTTGAAGCAA
GACCCCGATGCTAAGACCAACTATGAAGAAGCGGTTGAGGCTGCCAAAAGCATCGATACAGATATGAAAATCGTCCCTGT
CACAACGGTTCAAGAAGCCATTGACTATCTTCGTGACACGGATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.941

93.923

0.638