Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNK06_RS19035 Genome accession   NZ_CP126097
Coordinates   3569345..3570058 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain KF24     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3564345..3575058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS19015 (QNK06_19015) yvcT 3564490..3565467 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  QNK06_RS19020 (QNK06_19020) psdB 3565504..3567444 (-) 1941 WP_249850831.1 lantibiotic ABC transporter permease PsdB -
  QNK06_RS19025 (QNK06_19025) psdA 3567419..3568198 (-) 780 WP_038829455.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QNK06_RS19030 (QNK06_19030) psdS 3568281..3569351 (-) 1071 WP_249850830.1 two-component sensor histidine kinase PsdS -
  QNK06_RS19035 (QNK06_19035) braR 3569345..3570058 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  QNK06_RS19040 (QNK06_19040) - 3570205..3570414 (+) 210 WP_283933797.1 hypothetical protein -
  QNK06_RS19045 (QNK06_19045) yvcN 3570450..3571214 (-) 765 WP_232567137.1 arylamine N-acetyltransferase -
  QNK06_RS19050 (QNK06_19050) crh 3571215..3571472 (-) 258 WP_232567136.1 HPr family phosphocarrier protein -
  QNK06_RS19055 (QNK06_19055) whiA 3571496..3572446 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  QNK06_RS19060 (QNK06_19060) mgfK 3572469..3573422 (-) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  QNK06_RS19065 (QNK06_19065) rapZ 3573424..3574311 (-) 888 WP_003243903.1 RNase adapter RapZ -
  QNK06_RS19070 (QNK06_19070) yvcI 3574336..3574812 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=767023 QNK06_RS19035 WP_003228163.1 3569345..3570058(-) (braR) [Bacillus subtilis strain KF24]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=767023 QNK06_RS19035 WP_003228163.1 3569345..3570058(-) (braR) [Bacillus subtilis strain KF24]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCATTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43