Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNK06_RS16290 Genome accession   NZ_CP126097
Coordinates   3069193..3069888 (-) Length   231 a.a.
NCBI ID   WP_283934484.1    Uniprot ID   -
Organism   Bacillus subtilis strain KF24     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3064193..3074888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS16270 (QNK06_16270) yttA 3064620..3065366 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  QNK06_RS16275 (QNK06_16275) bceB 3065403..3067343 (-) 1941 WP_283933681.1 bacitracin ABC transporter permease BceB -
  QNK06_RS16280 (QNK06_16280) bceA 3067333..3068094 (-) 762 WP_283933682.1 bacitracin ABC transporter ATP-binding protein BceA -
  QNK06_RS16285 (QNK06_16285) bceS 3068196..3069200 (-) 1005 WP_283933683.1 two-component sensor histidine kinase BceS -
  QNK06_RS16290 (QNK06_16290) braR 3069193..3069888 (-) 696 WP_283934484.1 two-component response regulator BceR Regulator
  QNK06_RS16295 (QNK06_16295) ytrF 3069985..3071295 (-) 1311 WP_021480351.1 ABC transporter permease YtrF -
  QNK06_RS16300 (QNK06_16300) ytrE 3071285..3071980 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QNK06_RS16305 (QNK06_16305) ytrD 3071995..3072972 (-) 978 WP_283933684.1 ABC transporter permease YtrD -
  QNK06_RS16310 (QNK06_16310) - 3073004..3073990 (-) 987 WP_283933685.1 ABC transporter permease subunit -
  QNK06_RS16315 (QNK06_16315) ytrB 3073984..3074862 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26881.80 Da        Isoelectric Point: 5.9576

>NTDB_id=767012 QNK06_RS16290 WP_283934484.1 3069193..3069888(-) (braR) [Bacillus subtilis strain KF24]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIKNFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=767012 QNK06_RS16290 WP_283934484.1 3069193..3069888(-) (braR) [Bacillus subtilis strain KF24]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTAAGAATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTTCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGTTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGGGACCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377