Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QNK06_RS05435 Genome accession   NZ_CP126097
Coordinates   1036327..1037070 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain KF24     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1031327..1042070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK06_RS05400 (QNK06_05400) yhaI 1031654..1031995 (+) 342 WP_009966921.1 YhaI family protein -
  QNK06_RS05405 (QNK06_05405) scoC 1031992..1032603 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QNK06_RS05410 (QNK06_05410) yhaH 1032782..1033138 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QNK06_RS05415 (QNK06_05415) - 1033268..1033459 (+) 192 WP_003233238.1 hypothetical protein -
  QNK06_RS05420 (QNK06_05420) trpP 1033534..1034052 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  QNK06_RS05425 (QNK06_05425) serC 1034177..1035256 (-) 1080 WP_283934201.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QNK06_RS05430 (QNK06_05430) hinT 1035403..1035840 (-) 438 WP_080529127.1 HIT family protein -
  QNK06_RS05435 (QNK06_05435) pptA 1036327..1037070 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QNK06_RS05440 (QNK06_05440) ecsB 1037063..1038289 (+) 1227 WP_049140674.1 ABC transporter permease EcsB -
  QNK06_RS05445 (QNK06_05445) ecsC 1038309..1039019 (+) 711 WP_049140675.1 EcsC family protein -
  QNK06_RS05450 (QNK06_05450) sndC 1039037..1040227 (-) 1191 WP_283934459.1 N-acetyl amino acid acetylase SndC -
  QNK06_RS05455 (QNK06_05455) - 1040299..1041690 (-) 1392 WP_283934202.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=766925 QNK06_RS05435 WP_003233230.1 1036327..1037070(+) (pptA) [Bacillus subtilis strain KF24]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=766925 QNK06_RS05435 WP_003233230.1 1036327..1037070(+) (pptA) [Bacillus subtilis strain KF24]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCAGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCCTTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547