Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNH31_RS17640 Genome accession   NZ_CP126094
Coordinates   3418657..3419370 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain G2S2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3413657..3424370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS17620 (QNH31_17620) yvcT 3413802..3414779 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  QNH31_RS17625 (QNH31_17625) psdB 3414816..3416756 (-) 1941 WP_041850493.1 lantibiotic ABC transporter permease PsdB -
  QNH31_RS17630 (QNH31_17630) psdA 3416731..3417510 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QNH31_RS17635 (QNH31_17635) psdS 3417593..3418663 (-) 1071 WP_041850492.1 two-component sensor histidine kinase PsdS -
  QNH31_RS17640 (QNH31_17640) braR 3418657..3419370 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  QNH31_RS17645 (QNH31_17645) - 3419717..3420487 (-) 771 WP_043940202.1 hypothetical protein -
  QNH31_RS17650 (QNH31_17650) - 3420615..3420824 (+) 210 WP_040081725.1 hypothetical protein -
  QNH31_RS17655 (QNH31_17655) yvcN 3420888..3421652 (-) 765 WP_080332556.1 arylamine N-acetyltransferase -
  QNH31_RS17660 (QNH31_17660) crh 3421653..3421910 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QNH31_RS17665 (QNH31_17665) whiA 3421934..3422884 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  QNH31_RS17670 (QNH31_17670) mgfK 3422907..3423860 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=766869 QNH31_RS17640 WP_003228163.1 3418657..3419370(-) (braR) [Bacillus subtilis strain G2S2]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=766869 QNH31_RS17640 WP_003228163.1 3418657..3419370(-) (braR) [Bacillus subtilis strain G2S2]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43