Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   O4M77_RS10865 Genome accession   NZ_CP114606
Coordinates   2298121..2302638 (-) Length   1505 a.a.
NCBI ID   WP_166137675.1    Uniprot ID   -
Organism   Acinetobacter sp. YWS30-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2293121..2307638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O4M77_RS10835 (O4M77_10820) elsL 2294166..2294678 (-) 513 WP_159123377.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  O4M77_RS10840 (O4M77_10825) - 2294675..2295112 (-) 438 WP_125278257.1 YbaN family protein -
  O4M77_RS10845 (O4M77_10830) - 2295201..2296076 (+) 876 WP_004784973.1 DUF1853 family protein -
  O4M77_RS10850 (O4M77_10835) - 2296192..2296341 (+) 150 WP_004784975.1 entericidin A/B family lipoprotein -
  O4M77_RS10855 (O4M77_10840) dapE 2296465..2297601 (+) 1137 WP_004784977.1 succinyl-diaminopimelate desuccinylase -
  O4M77_RS10860 (O4M77_10845) - 2297662..2298120 (-) 459 WP_004784978.1 hypothetical protein -
  O4M77_RS10865 (O4M77_10850) chpA 2298121..2302638 (-) 4518 WP_166137675.1 Hpt domain-containing protein Regulator
  O4M77_RS10870 (O4M77_10855) - 2302806..2304875 (-) 2070 WP_166137678.1 methyl-accepting chemotaxis protein -
  O4M77_RS10875 (O4M77_10860) - 2304922..2305458 (-) 537 WP_159123371.1 chemotaxis protein CheW -
  O4M77_RS10880 (O4M77_10865) - 2305464..2305832 (-) 369 WP_004784985.1 response regulator -
  O4M77_RS10885 (O4M77_10870) pilG 2305858..2306241 (-) 384 WP_180011986.1 twitching motility response regulator PilG Regulator
  O4M77_RS10890 (O4M77_10875) - 2306525..2307169 (+) 645 WP_159123370.1 hypothetical protein -

Sequence


Protein


Download         Length: 1505 a.a.        Molecular weight: 168649.22 Da        Isoelectric Point: 4.2481

>NTDB_id=766838 O4M77_RS10865 WP_166137675.1 2298121..2302638(-) (chpA) [Acinetobacter sp. YWS30-1]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSDPAHQENLKTIRRHFHTLKGSGRMVGAKSA
GEIAWAVEDTLNRVLSGSIQLTPTIQQYAKAVLNIYQFTLYPKFKQVQELDVDLRPVVLLGQQLQQQMTPEPALEELLQL
ADSLTAEGQITGLELGDSAEDQDTTAAIEISTTEFELEEADSEDAARSDVEETVAIFIEEAEEHLETIAKFLRSENEKVQ
DYNALIRAIHTLRGSSSMAQIEEIFEASSKVEHLFKTLLQDEIASTSKETAVLIQYAEFVSDYLHLLRQGDSSKLAAVYA
TFERVWNDYGFAATETETVETQGLVTKLVELEIDLLLDAEFEFDKRAKVDYPEYIQALSEQAAELLAHTDNRAALGIHEF
TTDLKSAYDALLEKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDDTQKTLSELAAFVQQDLEIFAEDNIPAEQ
VSEEISIPEAATTASIDFAALSQRIASDRQYIDSAETQRDFDEDLLNIFLEEADELLVGIDEDLNTWSKKQDDTTSLNNL
MRHLHTLKGGANMITASHIGSISHELESIYERIIRQQIAVTPTLIQIIRLVQDNVSDRIQSIRDEGIDYPAVEAISILQN
IQALVAGQAVAAPVETSIPVVEFEYAEATTESVETVDDAPEEIASENTDSDLEPALGLEDEQVELTETETLTEAVEVVAE
ERSEEDELKSIVEETFLEESEEILDNTEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMVENEKVASIAYELETTFEQF
AVYHFNSNAYDGLLQKTLAWLRQAIFQHDYSNFEQIQSSLKKIAYVDVTAQLPERLAKTETLVTENSFEFVEGDGTEPPR
MMGEWVDTGNTDTSHEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIA
KHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLSDKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRM
LPRLQRIVRQTSTTLNRPAELIVQNSEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEVGSILLNISRQGT
DVIVSFSDDGKGIDAEKIREKALSQGLIKEDQTLDSEELLQFIFHPGFSTAKSVTQISGRGVGLDVVQSEIKSLGGHVSV
SSEVGKGTTFTIRVPTTVAVSDALMVKVGDQQYAVSLAQIDRIVRIAPSTLETYFNSKDDFFKIDGVNYKLRYLSEFVSN
QPIPRLNNVAHSLPVLLIKGNSGQTIALLVDQLVGSRAQIVVKPIGHQFANIGVVTGATILGDGQVCLILDGQNIARQIH
GTQRVKHMQDQRDGSRSGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDG
FEVTNLVRHHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQGS

Nucleotide


Download         Length: 4518 bp        

>NTDB_id=766838 O4M77_RS10865 WP_166137675.1 2298121..2302638(-) (chpA) [Acinetobacter sp. YWS30-1]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGACAGTTATCTTGATCAAGATGCAGAAATTCT
TGAAATTTTTGTCGAGGAAATCGAAGAAATTTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGTGATCCGGCTC
ATCAGGAAAACCTGAAAACCATTCGCCGCCATTTTCATACCCTGAAAGGTTCAGGCCGTATGGTGGGGGCTAAATCTGCG
GGTGAAATTGCATGGGCAGTGGAAGATACCTTAAACCGGGTACTTTCAGGTTCGATCCAGTTAACGCCTACGATTCAACA
GTATGCCAAAGCTGTACTGAATATTTACCAGTTTACTTTATATCCAAAATTCAAACAGGTGCAGGAACTCGATGTTGACC
TGCGCCCAGTCGTGCTTTTAGGTCAGCAATTACAACAACAAATGACACCTGAACCGGCTTTAGAAGAACTCTTGCAACTG
GCAGACAGTCTGACTGCCGAAGGCCAGATCACAGGTCTTGAGCTAGGTGATTCGGCTGAAGATCAAGATACAACTGCAGC
AATAGAAATAAGCACAACAGAATTTGAGCTTGAAGAAGCTGATAGTGAAGATGCTGCACGTAGTGATGTAGAAGAAACCG
TGGCGATCTTTATCGAGGAAGCGGAAGAGCATCTCGAAACGATTGCCAAGTTCCTGCGTAGCGAAAATGAAAAAGTGCAG
GATTATAATGCATTGATTCGTGCTATTCATACTTTGCGCGGCAGTTCGTCCATGGCACAGATCGAAGAAATCTTCGAGGC
CAGCTCTAAAGTAGAACATCTGTTTAAAACACTGCTTCAGGATGAAATTGCATCTACCTCAAAAGAAACTGCTGTATTAA
TCCAGTATGCTGAATTTGTCAGTGACTATCTGCATTTGTTACGTCAGGGTGATAGCAGCAAACTGGCAGCAGTGTATGCG
ACTTTTGAGCGTGTCTGGAATGATTATGGCTTCGCAGCCACTGAAACGGAAACAGTTGAAACCCAAGGTCTGGTGACTAA
GCTGGTTGAACTGGAGATTGACCTGTTGCTGGATGCCGAATTTGAATTCGATAAACGGGCTAAAGTCGATTATCCGGAAT
ATATTCAGGCTTTAAGCGAGCAGGCTGCCGAGCTGCTTGCACATACAGATAACCGTGCCGCACTGGGTATTCATGAGTTT
ACGACAGATTTAAAATCTGCTTATGATGCCTTGCTGGAAAAACCGGTACTGCTGAATAGTGATTATGCTTATGAGCTGTT
TGCCCAGGCACATCAGGAATTCATTCATTTATTCGATACCCTAGCAGCAGGCCAGCGTGTCATTCTGAATGATGATACGC
AAAAAACCTTGAGTGAACTGGCTGCATTTGTACAGCAGGACCTGGAAATCTTTGCCGAAGACAATATCCCTGCTGAACAA
GTATCAGAAGAAATTTCTATTCCTGAAGCTGCAACCACAGCCAGCATTGACTTTGCTGCTTTAAGTCAGCGTATTGCTTC
TGATCGCCAATACATTGACAGCGCAGAAACTCAGCGTGATTTCGATGAGGATCTACTGAATATCTTCCTCGAAGAAGCAG
ATGAATTACTGGTGGGTATTGATGAAGATCTGAATACCTGGAGTAAGAAGCAGGATGATACGACTTCACTTAACAATCTG
ATGCGTCATTTGCACACCTTAAAAGGTGGTGCAAACATGATTACCGCTTCTCATATCGGTTCGATCTCGCACGAACTGGA
AAGTATTTATGAGCGAATCATCCGTCAGCAGATTGCAGTAACGCCTACTTTGATTCAAATCATTCGTCTGGTGCAAGATA
ACGTTTCTGACCGTATCCAGTCGATCCGTGATGAAGGTATCGATTATCCAGCGGTTGAAGCAATTTCGATTCTGCAAAAT
ATTCAGGCATTGGTGGCTGGTCAAGCTGTTGCAGCTCCGGTAGAAACATCGATTCCTGTTGTCGAGTTTGAATATGCAGA
AGCTACTACTGAATCTGTAGAGACAGTAGATGATGCACCGGAAGAGATTGCATCAGAAAATACAGATTCAGATCTAGAGC
CAGCTTTAGGCTTAGAAGATGAACAAGTTGAGCTTACTGAAACAGAAACCTTAACTGAAGCAGTTGAAGTTGTAGCAGAA
GAACGCTCTGAAGAAGATGAACTGAAGTCGATTGTTGAAGAAACCTTCCTGGAAGAATCAGAAGAGATTCTCGACAATAC
CGAAAAACTGCTGAACCAATGGTTTGATCAGCGTAGTGACCGTAGCTTATTGCTTCAATTACAACGTGCTGCCCACAGTA
TCAAGGGTGGTGCGCGCATGGTTGAAAACGAAAAGGTGGCCAGCATTGCGTATGAACTGGAAACCACATTCGAACAGTTT
GCGGTATATCACTTTAACTCGAATGCTTATGATGGCCTGCTGCAAAAAACACTGGCTTGGTTAAGACAAGCGATCTTCCA
GCATGACTATAGCAATTTTGAACAGATCCAAAGCAGCCTGAAAAAGATTGCTTATGTGGATGTTACTGCGCAGCTGCCGG
AACGTTTGGCTAAAACAGAAACGCTGGTCACAGAAAATAGCTTCGAGTTTGTCGAAGGTGATGGTACTGAGCCACCACGT
ATGATGGGCGAATGGGTTGATACCGGTAATACCGATACCAGCCACGAGATGATCCGTATCTCTGCTGATCTGGTTGAGAA
GATGATCGACCTGTCAGGCGAGAATGCAATTAACCGTTCGCGTATCGAGATGGATTTGGGTCAGCTCGGTAATACTCTGA
ACGAGATGGAACTGGCGATCAAGCGTCTGGCGGATCAGTTGCGCCGAATGGAAGGCGAGCTAGAATCTCAAATTATTGCC
AAACACGGTTCAGAAAACTCGCGTTATGCAGACTTTGACCCACTGGAAATGGACCAATATTCGTCCCTGAATCAGTTGTC
CAAGTCGTTAGCGGAATCTGCTTCGGACTTGGTTGACTTCAAGAGCACTCTATCTGACAAGATTCGTGAAACTGAAGGTT
TGTTATTGCAACAATCACGGATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACTCGTCTGGTACCGTTTGACCGGATG
TTGCCACGTTTACAACGTATCGTACGTCAGACTTCTACGACTTTGAACCGTCCAGCTGAATTGATTGTTCAGAATAGTGA
AGGTGAATTAGACCGTAATATTCTGGAACGTCTGGTAACGCCATTCGAGCATATGCTACGTAATGCGATTGACCATGGTC
TGGAAGATACAGCAGATCGAATTGCCCTGAATAAACCAGAAGTCGGTTCAATCCTGTTGAATATTAGCCGTCAGGGTACA
GATGTCATCGTCTCATTTAGTGATGATGGTAAAGGTATCGATGCTGAGAAGATTCGTGAGAAAGCACTGAGCCAAGGCCT
GATCAAAGAAGATCAGACGCTGGATTCGGAAGAGCTACTGCAATTCATTTTCCATCCAGGCTTCAGTACTGCTAAATCTG
TAACCCAGATTTCAGGTCGTGGCGTCGGACTGGATGTAGTACAAAGCGAGATCAAGTCGCTGGGTGGTCACGTATCTGTC
AGCTCTGAAGTCGGCAAAGGCACAACCTTCACTATTCGCGTACCGACGACTGTAGCGGTCAGCGATGCCTTGATGGTAAA
AGTGGGCGATCAGCAATACGCCGTTTCTCTGGCGCAAATCGACCGTATTGTACGTATTGCACCATCTACTCTGGAAACTT
ACTTCAACAGTAAAGACGATTTCTTCAAGATTGATGGCGTTAATTACAAATTGCGTTACCTGTCTGAGTTCGTATCGAAT
CAGCCAATTCCTCGTCTGAATAATGTGGCGCATTCATTACCAGTATTGCTGATTAAAGGGAATAGTGGTCAAACTATTGC
CTTGTTAGTCGATCAACTCGTCGGTTCACGTGCACAGATCGTGGTGAAACCAATCGGCCATCAGTTCGCCAATATTGGTG
TAGTGACCGGTGCGACAATTCTCGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCTCGTCAGATCCAT
GGTACGCAGCGTGTGAAACACATGCAGGATCAACGCGATGGTTCACGTTCTGGCAATGCTCGCCGTCTGGTAATGATCGT
GGATGACTCGGTGACTGTACGTAAGGTGACCTCGCGTCTACTTGAGCGTCAGGGCTATGATATAGTCACCGCCAAAGATG
GTGTAGATGCGATTGAGCAGCTTGAAAATGTCCGTCCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGT
TTTGAGGTCACGAACCTGGTTCGTCACCACGATATTCACCGTGACCTGCCAATCATCATGATTACTTCACGTACTGGTGA
AAAACACCGTGAACGTGCTTTCAGTCTGGGCGTAACCCACTACATGGGCAAACCGTTCCAGGAAGCTGAATTACTGGCGA
ATATTCAACAGTTAATTGCTGAAAAACAGGGGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.761

100

0.615