Detailed information NTG0766799

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: O4J62_RS05935
• Genome accession: NZ_CP114601
• Coordinates: 1234484..1235107 (+)
• Length: 207 a.a.
• NCBI ID: WP_131261480.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain TT1-3_T
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1229484..1240107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4J62_RS05900 (O4J62_05900)	kdsB	1229936..1230697 (+)	762	WP_004976805.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
O4J62_RS05905 (O4J62_05905)	-	1230712..1231701 (+)	990	WP_131261482.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
O4J62_RS05910 (O4J62_05910)	-	1231712..1232053 (+)	342	WP_026438361.1	PilZ domain-containing protein	-
O4J62_RS05915 (O4J62_05915)	-	1232078..1232851 (+)	774	WP_004976800.1	TatD family hydrolase	-
O4J62_RS05920 (O4J62_05920)	-	1232945..1233559 (+)	615	WP_004976797.1	TetR/AcrR family transcriptional regulator	-
O4J62_RS05925 (O4J62_05925)	-	1233566..1234117 (+)	552	WP_131261481.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
O4J62_RS05930 (O4J62_05930)	xcpV	1234107..1234487 (+)	381	WP_004976793.1	type II secretion system minor pseudopilin GspI	Machinery gene
O4J62_RS05935 (O4J62_05935)	xcpW	1234484..1235107 (+)	624	WP_131261480.1	type II secretion system minor pseudopilin GspJ	Machinery gene
O4J62_RS05940 (O4J62_05940)	gspK	1235121..1236104 (+)	984	WP_171501107.1	type II secretion system minor pseudopilin GspK	-
O4J62_RS05945 (O4J62_05945)	-	1236287..1236883 (+)	597	WP_104851897.1	6-pyruvoyl trahydropterin synthase family protein	-
O4J62_RS05950 (O4J62_05950)	ung	1236921..1237634 (+)	714	WP_004976786.1	uracil-DNA glycosylase	-
O4J62_RS05955 (O4J62_05955)	-	1237631..1238752 (+)	1122	WP_004976784.1	enoyl-CoA hydratase/isomerase family protein	-
O4J62_RS05960 (O4J62_05960)	tadA	1238780..1239271 (+)	492	WP_004976782.1	tRNA adenosine(34) deaminase TadA	-
O4J62_RS05965 (O4J62_05965)	-	1239373..1239804 (+)	432	WP_019836521.1	SRPBCC family protein	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23877.25 Da
• Isoelectric Point: 6.2606

>NTDB_id=766799 O4J62_RS05935 WP_131261480.1 1234484..1235107(+) (xcpW) [Acinetobacter towneri strain TT1-3_T]
MSTKKGFTLVELLVAIAIFAVLSALGWKVFDYLAKVKDRNAMHEANLEQLQESYQQILRDTMQAVPLTANVKGQQQPALV
LQNGRFNFSKTGVTDPLQQSISPHERVEYQYRADEKKLYRLKYRNLHQTGNDQPESSVMLDEVEAFEIMVLNPNELSSWP
ESSVDSQQTEQLRLLPKGIKINLTVRDVQYEWIFSLLQTDFLKKKDN

Nucleotide

• Length: 624 bp

>NTDB_id=766799 O4J62_RS05935 WP_131261480.1 1234484..1235107(+) (xcpW) [Acinetobacter towneri strain TT1-3_T]
ATGAGTACAAAGAAAGGCTTCACTTTAGTTGAGTTGCTAGTCGCTATTGCAATTTTTGCAGTGCTGTCTGCTTTGGGTTG
GAAAGTATTTGATTATCTCGCCAAAGTCAAAGATCGCAATGCGATGCATGAAGCCAATCTAGAACAGTTGCAAGAAAGCT
ATCAACAAATATTACGTGACACGATGCAGGCTGTTCCATTAACGGCCAATGTCAAAGGGCAGCAACAACCTGCTTTGGTT
TTACAAAATGGACGTTTTAATTTCAGTAAAACAGGGGTGACCGATCCTTTGCAGCAGAGTATTTCACCCCATGAGCGTGT
TGAATATCAATATCGTGCCGATGAAAAAAAATTGTATCGTTTAAAATATCGTAATTTGCATCAAACGGGCAATGATCAGC
CTGAGTCGAGCGTGATGTTGGATGAAGTCGAAGCCTTTGAGATTATGGTTTTGAATCCAAATGAATTGAGCAGTTGGCCT
GAAAGCAGTGTCGATTCGCAGCAAACTGAACAATTAAGGCTACTCCCGAAAGGAATAAAAATAAATTTAACCGTGCGTGA
CGTGCAATACGAATGGATATTTAGCTTATTGCAGACTGATTTTTTAAAGAAGAAAGACAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-193)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	60.199	97.101	0.585