Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | O4J62_RS05930 | Genome accession | NZ_CP114601 |
| Coordinates | 1234107..1234487 (+) | Length | 126 a.a. |
| NCBI ID | WP_004976793.1 | Uniprot ID | A0A2A5PJN4 |
| Organism | Acinetobacter towneri strain TT1-3_T | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1229107..1239487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O4J62_RS05900 (O4J62_05900) | kdsB | 1229936..1230697 (+) | 762 | WP_004976805.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| O4J62_RS05905 (O4J62_05905) | - | 1230712..1231701 (+) | 990 | WP_131261482.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| O4J62_RS05910 (O4J62_05910) | - | 1231712..1232053 (+) | 342 | WP_026438361.1 | PilZ domain-containing protein | - |
| O4J62_RS05915 (O4J62_05915) | - | 1232078..1232851 (+) | 774 | WP_004976800.1 | TatD family hydrolase | - |
| O4J62_RS05920 (O4J62_05920) | - | 1232945..1233559 (+) | 615 | WP_004976797.1 | TetR/AcrR family transcriptional regulator | - |
| O4J62_RS05925 (O4J62_05925) | - | 1233566..1234117 (+) | 552 | WP_131261481.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| O4J62_RS05930 (O4J62_05930) | xcpV | 1234107..1234487 (+) | 381 | WP_004976793.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| O4J62_RS05935 (O4J62_05935) | xcpW | 1234484..1235107 (+) | 624 | WP_131261480.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| O4J62_RS05940 (O4J62_05940) | gspK | 1235121..1236104 (+) | 984 | WP_171501107.1 | type II secretion system minor pseudopilin GspK | - |
| O4J62_RS05945 (O4J62_05945) | - | 1236287..1236883 (+) | 597 | WP_104851897.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| O4J62_RS05950 (O4J62_05950) | ung | 1236921..1237634 (+) | 714 | WP_004976786.1 | uracil-DNA glycosylase | - |
| O4J62_RS05955 (O4J62_05955) | - | 1237631..1238752 (+) | 1122 | WP_004976784.1 | enoyl-CoA hydratase/isomerase family protein | - |
| O4J62_RS05960 (O4J62_05960) | tadA | 1238780..1239271 (+) | 492 | WP_004976782.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13964.99 Da Isoelectric Point: 6.2920
>NTDB_id=766798 O4J62_RS05930 WP_004976793.1 1234107..1234487(+) (xcpV) [Acinetobacter towneri strain TT1-3_T]
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQQS
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQQS
Nucleotide
Download Length: 381 bp
>NTDB_id=766798 O4J62_RS05930 WP_004976793.1 1234107..1234487(+) (xcpV) [Acinetobacter towneri strain TT1-3_T]
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACAGG
ACAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAGCAATCATGA
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACAGG
ACAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAGCAATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
77.5 |
95.238 |
0.738 |