Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   O4J62_RS01585 Genome accession   NZ_CP114601
Coordinates   357024..359246 (-) Length   740 a.a.
NCBI ID   WP_323712667.1    Uniprot ID   -
Organism   Acinetobacter towneri strain TT1-3_T     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 352024..364246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O4J62_RS01560 (O4J62_01560) - 352072..352407 (-) 336 WP_004975930.1 chaperone modulator CbpM -
  O4J62_RS01565 (O4J62_01565) - 352790..353251 (-) 462 WP_004975935.1 DUF2147 domain-containing protein -
  O4J62_RS01570 (O4J62_01570) - 353461..353925 (-) 465 WP_004975938.1 DUF2147 domain-containing protein -
  O4J62_RS01575 (O4J62_01575) hslO 354184..355059 (-) 876 WP_154321102.1 Hsp33 family molecular chaperone HslO -
  O4J62_RS01580 (O4J62_01580) - 355110..356951 (-) 1842 WP_154321101.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  O4J62_RS01585 (O4J62_01585) priA 357024..359246 (-) 2223 WP_323712667.1 primosomal protein N' Machinery gene
  O4J62_RS01590 (O4J62_01590) gspF 359399..360604 (+) 1206 WP_323712668.1 type II secretion system inner membrane protein GspF -
  O4J62_RS01595 (O4J62_01595) gspG 360681..361115 (+) 435 WP_004975950.1 type II secretion system major pseudopilin GspG -
  O4J62_RS01600 (O4J62_01600) lnt 361227..362783 (-) 1557 WP_004975952.1 apolipoprotein N-acyltransferase -
  O4J62_RS01605 (O4J62_01605) - 362780..363619 (-) 840 WP_154321100.1 CBS domain-containing protein -
  O4J62_RS01610 (O4J62_01610) tusA 363817..364074 (+) 258 WP_004975955.1 sulfurtransferase TusA -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83776.01 Da        Isoelectric Point: 8.7648

>NTDB_id=766793 O4J62_RS01585 WP_323712667.1 357024..359246(-) (priA) [Acinetobacter towneri strain TT1-3_T]
MPDSTLDPQPVYRIRVAVPVYLYDCFDYMLSAAQYQQAEVGARVLVSFGRQNLVGIIVEKLALDTPIDPRFKLKAISELL
DEQAILDPKVLTLLTWSAQYYQFPIGEVMQSALPSLLRPAKPYNLLARTWKLLDAHAEAKITRSEKQQEAYKILKLHPSG
TSENILNLAGIETATLKALANKEICACVLEAQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQHGISQQLIDEIKKRLAKKEQVLVFLNRRGYAPVLICESCAWQAKCPNCDANFTLHHQPYTHLHCHHCGTIH
RKPEQCPACNHAELKPIGMGTAKVEDSLNELFPNVDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSVRPDHPLLTTLVEGDYRKFAKQSLKERKAAQL
PPYRYSALIRCESKNQELNQQFLQQHAQWLREHSEQLIEIWGPIPAPMERKAGRFHAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=766793 O4J62_RS01585 WP_323712667.1 357024..359246(-) (priA) [Acinetobacter towneri strain TT1-3_T]
ATGCCAGATTCCACTTTAGACCCACAGCCTGTTTATCGTATTCGAGTGGCTGTACCCGTATATCTTTACGACTGCTTCGA
TTATATGCTCAGTGCAGCACAATATCAGCAAGCAGAAGTGGGCGCGCGGGTCTTGGTTTCTTTTGGTCGGCAAAACTTGG
TCGGAATTATTGTCGAAAAACTGGCACTCGACACCCCAATTGATCCACGTTTTAAACTCAAAGCCATTAGCGAACTGTTA
GATGAGCAAGCGATTTTAGACCCTAAAGTTTTAACTTTGTTGACATGGTCGGCACAATATTATCAATTCCCGATTGGTGA
AGTGATGCAAAGTGCCTTACCTAGCTTATTGCGCCCAGCCAAACCCTATAATTTATTGGCACGTACTTGGAAATTGTTGG
ATGCACATGCCGAAGCTAAAATTACACGCTCAGAAAAACAACAAGAAGCCTATAAAATTTTAAAGCTGCATCCTTCGGGA
ACTTCTGAAAATATTTTAAATTTGGCAGGCATTGAAACAGCAACCCTAAAAGCCTTGGCGAATAAAGAAATTTGCGCATG
TGTTTTGGAAGCCCAAGATTTTAGCCCAATGCCAGTGACTTTGGCGCAAATGCCTTTAACCCCTAATCCAGATCAGAAAA
AAGCCATCGACAGCGTACTTAAAGTACGGCAGCAATATAAGGCATTTTTACTGGATGGTTTAACGGGTAGCGGTAAAACT
GAAGTGTACTTACACATCATGCATGAGGTACTAAAACAGGGCAAACAAGTGTTGGTGTTAGTACCTGAAATTGGTCTAAC
GCCACAAACCATTAGCCGTTTCCAATCGCGTTTTCACTGCCACATCGCCCTCTTACATTCAGGTTTAAATGATTCCAAGC
GTTTGCAGGCGTGGCAAGCCGCACAAACGGGCAAAGCCTCGATTATTTTAGGTACACGTTCTGCGATTTATACCCCATTG
CCAAATTTAGGCTTGATTATTTTAGATGAAGAACACGACCTGTCTTTTAAACAGCAGGAAGGTTTTCGCTACCATGCCCG
TGATGTTGCGCTCTATCGTGCCCATCTGGAAAATTGCCCTGTTATTTTAGGTTCGGCAACTCCAAGCATTGACAGCTATG
CACTAGTCGATCAAGGCAAAATGCAATGTCTGGAATTAAATCAACGCGCGGGCACGGCACTCATGCCCAAAATCCACCTG
ATTGATTTAAAAATTGCCAAAAAACAGCACGGTATTAGCCAACAATTGATTGATGAAATCAAAAAACGCTTGGCTAAAAA
AGAACAAGTTTTGGTGTTTTTAAACCGACGCGGCTATGCACCCGTATTGATTTGTGAGAGCTGTGCATGGCAAGCCAAAT
GCCCGAATTGTGATGCCAACTTTACCTTGCATCATCAACCTTATACACATTTGCATTGCCACCACTGCGGTACGATTCAT
CGTAAACCTGAGCAATGCCCTGCCTGCAACCATGCAGAACTCAAACCAATTGGCATGGGCACTGCCAAAGTCGAAGACAG
TTTAAACGAGCTGTTTCCCAATGTAGATGTGATTCGGGTAGATCGTGACTCAACCAGTCGTGTTGGCAGTTGGCAAAAAA
TTTATGACCGTATTCAACGCAGCGAACCACTGATTTTATTGGGCACGCAAATGCTGGCCAAAGGGCATCATTTTCCGTAT
GTGACATTGGTGGCAATTTTAGATATTGATTCAGGCTTACTTAGTGTGGATATTCGCGCACCTGAACGCACGGCTCAACT
GATTGTGCAAGTGGCGGGACGTGCAGGGCGTGGTGAGCATAAAGGTGATGTTTATTTGCAAAGTGTGCGTCCTGATCATC
CACTTCTCACCACATTGGTCGAGGGAGATTACCGCAAGTTCGCCAAACAAAGTTTAAAAGAACGCAAAGCTGCACAATTA
CCGCCTTATCGTTACAGTGCTTTGATTCGCTGTGAATCTAAAAATCAGGAATTAAACCAGCAATTTTTACAACAACATGC
ACAATGGCTTAGAGAACATTCAGAACAATTAATTGAAATTTGGGGGCCGATTCCTGCGCCAATGGAACGTAAAGCAGGAC
GTTTCCATGCACACATGGTGTTGTTGTCTAAAGATCGGGCACGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCGCAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.279

100

0.734