Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QNH31_RS05400 Genome accession   NZ_CP126094
Coordinates   1044598..1045341 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain G2S2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1039598..1050341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH31_RS05365 (QNH31_05365) yhaI 1039928..1040269 (+) 342 WP_009966921.1 YhaI family protein -
  QNH31_RS05370 (QNH31_05370) scoC 1040266..1040877 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QNH31_RS05375 (QNH31_05375) yhaH 1041055..1041411 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QNH31_RS05380 (QNH31_05380) - 1041540..1041731 (+) 192 WP_014476318.1 hypothetical protein -
  QNH31_RS05385 (QNH31_05385) trpP 1041805..1042323 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  QNH31_RS05390 (QNH31_05390) serC 1042448..1043527 (-) 1080 WP_041851021.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QNH31_RS05395 (QNH31_05395) hinT 1043674..1044111 (-) 438 WP_003233231.1 HIT family protein -
  QNH31_RS05400 (QNH31_05400) pptA 1044598..1045341 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QNH31_RS05405 (QNH31_05405) ecsB 1045334..1046560 (+) 1227 WP_017695369.1 ABC transporter permease EcsB -
  QNH31_RS05410 (QNH31_05410) ecsC 1046580..1047290 (+) 711 WP_015715605.1 EcsC family protein -
  QNH31_RS05415 (QNH31_05415) sndC 1047308..1048498 (-) 1191 WP_015715606.1 N-acetyl amino acid acetylase SndC -
  QNH31_RS05420 (QNH31_05420) - 1048570..1049961 (-) 1392 WP_080332595.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=766773 QNH31_RS05400 WP_003233230.1 1044598..1045341(+) (pptA) [Bacillus subtilis strain G2S2]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=766773 QNH31_RS05400 WP_003233230.1 1044598..1045341(+) (pptA) [Bacillus subtilis strain G2S2]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTTGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAGCGGATGAATGAAGCGAAAAAGGGCGGGGCGAGCGT
GCTGATGTCAACGCACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547