Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNK02_RS15270 Genome accession   NZ_CP126083
Coordinates   2955686..2956381 (-) Length   231 a.a.
NCBI ID   WP_041851120.1    Uniprot ID   -
Organism   Bacillus subtilis strain C1_9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2950686..2961381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK02_RS15250 (QNK02_15250) yttA 2951113..2951859 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  QNK02_RS15255 (QNK02_15255) bceB 2951896..2953836 (-) 1941 WP_041851118.1 bacitracin ABC transporter permease BceB -
  QNK02_RS15260 (QNK02_15260) bceA 2953826..2954587 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QNK02_RS15265 (QNK02_15265) bceS 2954689..2955693 (-) 1005 WP_041851119.1 two-component sensor histidine kinase BceS -
  QNK02_RS15270 (QNK02_15270) braR 2955686..2956381 (-) 696 WP_041851120.1 two-component response regulator BceR Regulator
  QNK02_RS15275 (QNK02_15275) ytrF 2956478..2957788 (-) 1311 WP_041851121.1 ABC transporter permease YtrF -
  QNK02_RS15280 (QNK02_15280) ytrE 2957778..2958473 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QNK02_RS15285 (QNK02_15285) ytrD 2958488..2959465 (-) 978 WP_041851122.1 ABC transporter permease YtrD -
  QNK02_RS15290 (QNK02_15290) ytrC 2959495..2960481 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  QNK02_RS15295 (QNK02_15295) ytrB 2960475..2961353 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.82 Da        Isoelectric Point: 5.3775

>NTDB_id=766707 QNK02_RS15270 WP_041851120.1 2955686..2956381(-) (braR) [Bacillus subtilis strain C1_9]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=766707 QNK02_RS15270 WP_041851120.1 2955686..2956381(-) (braR) [Bacillus subtilis strain C1_9]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCAGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGAGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377