Detailed information NTG0766689

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: O4546_RS08265
• Genome accession: NZ_CP114590
• Coordinates: 1757216..1760620 (+)
• Length: 1134 a.a.
• NCBI ID: WP_269586839.1
• Uniprot ID: -
• Organism: Salinivibrio kushneri strain TGB19
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1752216..1765620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4546_RS08255 (O4546_08255)	rluC	1752334..1753284 (-)	951	WP_077605373.1	23S rRNA pseudouridine(955/2504/2580) synthase RluC	-
O4546_RS08260 (O4546_08260)	rne	1753979..1756927 (+)	2949	WP_269587770.1	ribonuclease E	-
O4546_RS08265 (O4546_08265)	chiS	1757216..1760620 (+)	3405	WP_269586839.1	response regulator	Regulator
O4546_RS08270 (O4546_08270)	-	1761837..1763525 (+)	1689	WP_069362207.1	ABC transporter substrate-binding protein	-
O4546_RS08275 (O4546_08275)	-	1763609..1764601 (+)	993	WP_069362206.1	ABC transporter permease	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 127167.47 Da
• Isoelectric Point: 6.8147

>NTDB_id=766689 O4546_RS08265 WP_269586839.1 1757216..1760620(+) (chiS) [Salinivibrio kushneri strain TGB19]
MKTLFTAYPFKRLHHTLMLAFLLLSLLPLIVVALFFLNAHSQDLQEQSTAHLLSVRDSKQQQVNDYFAAKEAEVLGFVAS
ELAYASGGHFYGLVNAFQRLRPNIDAARDYAQRRYYLGSGERVKTPVPKDDPHYSATERYRLLHKRYHRAYQALIARADF
DDLLLVDKQGNVTYSVKKLGNFGTNLLSDPHRNARLGQTFAALKQQTQQTKGKLDPTPKVIISDFSAEETDAPVAWLGAP
IIQQGYLHSYALFRLPNHALTKLMAPRETNAIETHLVGDDGKTRAHLTSKSQLISNTPAIEKAIAGETGVTRYQTQSGQT
MLAAYTPIRTHGLKWGLVAEVPTQVAYARIHQLQQLFIVAMLLAILAVVIASHYMSNFITRPLLQLTWAAEKVSAGDLDT
QIHHTSRRDEIGRLAVSFARMRHAIREKLDLIRQQNQTLEANITTIRAQNEELHVANKLKDEFLATTSHELRTPLHGMIG
IAEALIDGANGPISRNHQYQLSIIVNSGQRLAKLVDDLLDYHKMRYGQLDLEQGPVNLNAITQLVLSLAKHLKKDKPLNI
INQLSDTPIWVHADPQRLEQVMYNLLGNAIKFTDAGKIVISADTLDDRVRIQVVDTGKGIPAEQLSTVFEPLAQAVSSHY
HYQHGAGLGLSISRQLVELMGGQLYVSSQPQVGTTFSFTLPRVDEPPVLSTELTAFSTQHIHQDDTREALAHAASEAVEQ
SSKNNGLHILVVDDEPTNQQVLTSFLNIEGYQVNTASDGRTAIDHIATTKPDLILLDVLMPGMSGFEVCEQLRERFDHAA
LPIIMLTALNQPDDRIYGFEVGANDYLCKPFDKRELAARIATHLAASQAEQRRQENQRLEQALEQSARQQASLLETQSWL
ISQLSLAPEAMLGMRRDGQVRFVNQAAASLFGREQDEVKRMHGQALVKAPEQANHMERYQGPLTIYIEGQPQDVDGMLLR
FPAESDIDSLYVINTDAPVSQSRIQSLESAIEALSGYALGGDSRQLETLKAMGGEFEALAEKAQHQQQDKTNTRRQLIVD
AMVASLDYWEEATGKSKFDFAEQSGLWRVYLDRSSLQTRTLDKYLLIETLPKTPRWRTVLSSIRFILDHCDKRSPTRTQL
ESYYQQLRQLLLDD

Nucleotide

• Length: 3405 bp

>NTDB_id=766689 O4546_RS08265 WP_269586839.1 1757216..1760620(+) (chiS) [Salinivibrio kushneri strain TGB19]
ATGAAAACCTTGTTTACTGCTTACCCATTTAAACGCCTCCATCACACCTTGATGCTGGCCTTTCTGCTACTGAGTCTCCT
CCCTCTCATCGTGGTCGCTTTGTTTTTTCTCAACGCCCATAGCCAAGATCTCCAAGAGCAAAGCACAGCACACCTTTTAT
CGGTTCGCGACAGTAAGCAACAGCAAGTCAACGATTATTTTGCTGCCAAAGAGGCGGAAGTCCTTGGATTTGTCGCCTCG
GAGCTCGCCTATGCCAGTGGTGGTCATTTTTATGGTTTGGTCAATGCGTTTCAGCGACTACGACCAAACATCGACGCCGC
ACGTGACTACGCGCAACGTCGCTATTATCTTGGATCCGGTGAAAGGGTTAAAACGCCTGTGCCCAAGGACGATCCCCATT
ATTCCGCCACCGAGCGTTATCGGCTGCTCCATAAACGCTATCACCGCGCTTATCAAGCTTTGATCGCTCGCGCCGATTTT
GACGACTTACTCTTGGTCGACAAGCAAGGCAACGTCACCTATTCGGTGAAAAAGCTGGGCAACTTTGGCACTAACTTACT
CTCAGACCCGCATCGTAATGCACGATTAGGGCAGACGTTCGCGGCCCTGAAACAGCAAACGCAACAGACAAAAGGGAAGT
TAGATCCGACCCCTAAGGTGATTATCTCGGACTTTTCCGCTGAAGAGACCGACGCCCCGGTGGCATGGCTTGGCGCCCCT
ATTATTCAGCAAGGGTATCTGCATAGCTACGCGCTGTTCCGGCTTCCTAACCATGCCCTTACTAAGCTGATGGCACCTAG
AGAAACCAATGCGATTGAAACACACCTCGTCGGCGATGATGGCAAGACTCGAGCGCATTTAACCAGCAAAAGTCAGCTGA
TCAGTAACACGCCTGCCATAGAAAAAGCCATAGCCGGAGAAACGGGTGTCACCCGCTATCAAACCCAATCAGGCCAAACC
ATGCTCGCCGCTTACACCCCCATTCGCACCCACGGCCTGAAATGGGGACTCGTGGCTGAAGTCCCCACTCAAGTGGCCTA
CGCACGTATCCACCAGCTACAACAGCTTTTTATCGTCGCCATGTTACTTGCGATTCTCGCGGTGGTGATTGCCTCGCACT
ATATGTCCAACTTTATTACTCGCCCACTGCTTCAGCTTACATGGGCGGCCGAAAAAGTCAGTGCGGGTGACCTTGATACC
CAAATCCACCACACGAGTCGTCGTGATGAAATCGGGCGTTTGGCGGTGAGCTTTGCCCGTATGCGCCATGCCATTCGCGA
AAAACTAGACTTAATCCGCCAGCAGAATCAGACCTTAGAAGCTAACATCACCACTATACGTGCTCAGAATGAAGAGCTGC
ATGTCGCCAACAAGCTGAAAGATGAATTCTTGGCCACCACCTCTCATGAACTTCGCACCCCATTACACGGCATGATAGGG
ATTGCCGAAGCACTGATTGACGGTGCGAACGGTCCGATTAGTCGCAACCATCAGTATCAACTGTCGATTATCGTCAACAG
CGGCCAGCGCTTGGCCAAGCTGGTCGATGACCTCTTGGACTACCACAAAATGCGCTATGGGCAATTAGACTTGGAGCAAG
GCCCTGTCAACCTCAATGCCATCACTCAGCTTGTGCTGTCACTCGCCAAGCACCTTAAAAAAGATAAGCCGCTAAACATC
ATTAATCAGCTCAGCGACACGCCAATCTGGGTACACGCAGATCCCCAACGTCTTGAGCAAGTTATGTACAATTTACTGGG
AAATGCGATTAAGTTCACCGATGCGGGTAAGATTGTTATTAGCGCCGACACCTTGGACGATCGCGTTCGCATCCAAGTGG
TTGACACGGGTAAAGGGATCCCCGCAGAACAGTTAAGTACCGTTTTTGAACCGCTCGCACAAGCAGTAAGTAGCCACTAT
CATTATCAACACGGCGCAGGTCTTGGTCTCTCCATCAGTCGTCAACTTGTCGAGCTGATGGGCGGCCAGCTTTACGTCAG
CAGCCAGCCACAAGTGGGCACCACCTTTAGCTTCACCCTTCCGCGTGTCGATGAGCCCCCGGTGTTGAGCACCGAGCTTA
CCGCCTTCTCTACCCAGCACATTCATCAAGATGACACGAGAGAGGCGCTCGCTCACGCCGCTTCGGAAGCCGTTGAACAA
AGTAGTAAGAACAACGGGTTACATATTTTAGTCGTCGATGATGAGCCCACCAATCAACAAGTACTCACCAGCTTTCTAAA
TATTGAAGGCTATCAGGTCAATACAGCAAGCGATGGGCGCACAGCGATTGATCATATCGCCACCACAAAGCCAGATCTCA
TCTTACTCGACGTGCTCATGCCCGGCATGAGTGGATTCGAGGTCTGCGAGCAGCTGCGAGAGCGCTTTGACCATGCTGCC
CTTCCGATTATCATGCTGACCGCCTTAAATCAGCCTGATGATCGCATCTATGGCTTTGAGGTCGGCGCAAATGATTACCT
CTGTAAGCCCTTTGACAAAAGAGAGCTTGCCGCACGGATAGCCACACATCTTGCCGCCAGCCAAGCGGAACAACGCCGCC
AAGAAAACCAACGCCTCGAGCAGGCACTTGAACAAAGTGCCCGCCAACAAGCCAGCCTACTTGAAACCCAGTCTTGGTTG
ATTTCACAGCTCTCTCTCGCCCCTGAAGCCATGTTAGGTATGCGAAGAGATGGCCAGGTTCGCTTTGTTAACCAAGCGGC
AGCCTCCTTATTTGGGCGTGAACAGGACGAGGTAAAACGGATGCACGGTCAAGCCTTAGTGAAAGCGCCCGAGCAGGCCA
ATCATATGGAGCGCTATCAAGGCCCACTGACCATTTATATTGAAGGACAACCCCAAGACGTTGACGGTATGCTGCTGCGT
TTTCCAGCCGAGTCTGACATTGATAGCCTGTATGTCATCAACACAGACGCGCCCGTGTCTCAGTCTCGTATACAGAGTCT
AGAAAGCGCCATCGAAGCCTTATCTGGCTACGCATTAGGCGGAGACTCGCGCCAACTTGAAACGCTTAAAGCGATGGGCG
GGGAATTTGAAGCCCTTGCGGAAAAAGCGCAACACCAACAGCAAGATAAAACCAACACACGTAGACAGCTAATTGTTGAT
GCCATGGTAGCCAGCTTAGATTACTGGGAAGAAGCCACAGGCAAAAGCAAATTCGATTTTGCCGAGCAAAGTGGTCTCTG
GCGCGTCTACCTTGATCGTAGTAGCTTACAAACCCGCACACTGGATAAGTACCTGCTCATCGAAACCCTGCCAAAAACCC
CGCGGTGGCGCACGGTGCTGAGCTCCATTCGCTTTATCCTCGATCATTGCGATAAACGCAGTCCAACCCGCACTCAGCTG
GAGTCCTATTACCAACAACTTCGCCAGCTACTGCTAGACGACTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• Response regulator receiver domain (Response_reg) (729-840)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.168	100	0.573