Detailed information NTG0766658

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: N8M53_RS08205
• Genome accession: NZ_CP114588
• Coordinates: 1737229..1740633 (+)
• Length: 1134 a.a.
• NCBI ID: WP_269578417.1
• Uniprot ID: A0AA47KJ66
• Organism: Salinivibrio kushneri strain TGB11
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1732229..1745633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8M53_RS08195 (N8M53_08195)	rluC	1732319..1733281 (-)	963	WP_269578416.1	23S rRNA pseudouridine(955/2504/2580) synthase RluC	-
N8M53_RS08200 (N8M53_08200)	rne	1733975..1736923 (+)	2949	WP_269580008.1	ribonuclease E	-
N8M53_RS08205 (N8M53_08205)	chiS	1737229..1740633 (+)	3405	WP_269578417.1	response regulator	Regulator
N8M53_RS08210 (N8M53_08210)	-	1741522..1743210 (+)	1689	WP_269578418.1	ABC transporter substrate-binding protein	-
N8M53_RS08215 (N8M53_08215)	-	1743294..1744280 (+)	987	WP_046075428.1	ABC transporter permease	-
N8M53_RS08220 (N8M53_08220)	-	1744282..1745310 (+)	1029	WP_269578419.1	ABC transporter permease	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 127212.27 Da
• Isoelectric Point: 6.7067

>NTDB_id=766658 N8M53_RS08205 WP_269578417.1 1737229..1740633(+) (chiS) [Salinivibrio kushneri strain TGB11]
MKTLFTAYPFKRLHHTLMLAFLLLSLLPLILVALFFLNAHSQDLQEQSTAHLLSVRDSKQQQINDYFDAKEAEVLGFVAS
ELAYASGGHFYGLVNAFQRLRPNIDAARDYAQRRYYLGSGERVKTPVRKDDPNYSATERYRLLHKRYHRAYQALLARADF
DDLLLVDKQGNVTYSVKKLSNYGTNLLSGPHRDARLGQTFATLQQQTQQTKGKLDPTPKVIISDFSAEETDTRVAWLGAP
IIQQGYLHSYALFRLPSHALTRLMAPRETNAIETHLVGDDGKTRAHSTSNSELVSNSPAIEKALAGETGVTRYQAQSGQT
MLAAYTPIRTHGLKWGLVAEVPTQVAYARIHQLQQLFIVAMLLAILAVVVASHYMSNFITRPLLQLTWAAEKVSAGDLDT
QIHHTRRRDEIGRLAVSFARMRHAIREKLVLIRQQNQTLEANITTIRAQNEELHVANKLKDEFLATTSHELRTPLHGMIG
IAEALIDGANGPISRDHQYQLSIIVNSGQRLAKLVDDLLDYHKMRYGQLDLEQGPVNLNAITQLVLSLAKHLKKDKPLNI
INQLSDTPIWVHADPQRLEQVMYNLLGNAIKFTDAGKIVISADTLDDRVRIQVVDTGKGIPAEQLSTVFEPLAQAVSSHY
HYQHGAGLGLSISRQLVELMGGQLYVSSQTQVGTTFSFTLPSVDEPPVLSTEFTAFSTQHIHQADTREALARSSSEEVKP
SDNNNGLHILVVDDEPTNQQVLTSFLNIEGYQVSTASDGRTAIEHIATTKPDLILLDVLMPGMSGFEVCEQLRVRFDHAA
LPIIMLTALNQPDDRIYGFEIGANDYLCKPFDKRELAARIATHLAASQAEQRRQENQRLEQALEQSARQQASLLETQSWL
ISQLSLAPEAMLGMRRDGQVRFVNQAAASLFGREQDEVKRMHGQALVKAPEQANQVEHYQGPLTIYIEGQPQDVDGMLLR
FPAESDIDSLYVINTDAPVSQSRIQSLESAIEALSGYALGGDSSQLETLKAMGGEFEALAEKAQHQQQDKTNTRRQLIVD
AMVASLDYWEEATGKSKFDFAEQSGLWRVYLDRSSLQTRTLDKYLLIETLPKTPRWRTVLSSIRFILDHCDKRSTTRTQL
ESYYQQLRHLLLED

Nucleotide

• Length: 3405 bp

>NTDB_id=766658 N8M53_RS08205 WP_269578417.1 1737229..1740633(+) (chiS) [Salinivibrio kushneri strain TGB11]
ATGAAAACCTTGTTTACTGCTTATCCATTTAAACGCCTCCATCACACCTTGATGCTGGCCTTTCTTCTATTGAGCCTCCT
CCCTCTGATCTTAGTCGCCTTGTTTTTTCTTAACGCCCATAGCCAAGATCTCCAAGAACAAAGCACAGCTCACCTTTTAT
CGGTGCGCGACAGTAAACAACAGCAAATCAATGATTACTTTGATGCGAAAGAAGCGGAGGTGCTCGGATTTGTCGCTTCG
GAGCTCGCCTACGCCAGCGGTGGCCATTTTTATGGTTTGGTCAACGCATTTCAGCGACTACGACCAAACATCGACGCGGC
TCGTGATTACGCGCAACGCCGCTACTACCTTGGGTCCGGTGAGAGGGTGAAAACACCTGTGCGCAAGGACGATCCCAACT
ATTCCGCCACCGAGCGTTATCGGCTGCTGCACAAACGCTACCACCGCGCTTATCAAGCTTTGCTCGCCCGCGCAGATTTT
GACGATCTACTCTTGGTCGACAAGCAAGGCAACGTCACTTATTCGGTGAAAAAACTGAGCAACTATGGCACAAACTTACT
CTCAGGCCCTCACCGTGATGCACGATTGGGGCAAACGTTCGCGACCCTACAACAGCAAACGCAACAAACAAAAGGGAAGT
TAGATCCGACGCCTAAGGTGATTATCTCTGATTTTTCCGCGGAAGAGACCGACACCCGCGTTGCATGGCTGGGCGCCCCC
ATTATTCAGCAAGGGTATCTCCATAGCTACGCGCTCTTCCGGCTTCCTAGCCATGCCCTTACCAGGCTGATGGCACCCAG
AGAAACCAATGCGATTGAAACACACCTCGTCGGTGATGACGGCAAGACTCGTGCGCACTCAACCAGCAACAGTGAGCTTG
TCAGTAACTCGCCTGCCATAGAAAAAGCATTAGCCGGAGAAACGGGTGTTACCCGCTATCAAGCCCAGTCAGGCCAAACC
ATGCTCGCCGCCTACACGCCTATTCGCACGCACGGCCTGAAATGGGGACTCGTGGCAGAAGTGCCTACACAAGTGGCCTA
TGCACGCATCCACCAACTGCAACAGCTTTTTATCGTCGCCATGTTACTTGCTATTCTCGCAGTGGTGGTTGCCTCGCACT
ATATGTCCAACTTTATTACTCGCCCACTGCTTCAACTTACGTGGGCGGCCGAAAAAGTCAGTGCGGGTGACCTTGATACC
CAAATCCACCACACGCGTCGTCGTGATGAAATCGGGCGTTTGGCGGTGAGCTTTGCCCGTATGCGCCATGCCATCCGCGA
AAAGCTGGTCTTAATCCGCCAGCAGAACCAAACCTTAGAAGCTAACATCACCACCATACGTGCTCAGAATGAAGAGCTAC
ATGTGGCCAACAAACTGAAAGATGAATTCTTGGCAACCACCTCTCACGAACTTCGCACCCCATTGCACGGCATGATAGGG
ATTGCCGAAGCACTGATTGACGGTGCGAACGGTCCGATTAGTCGCGACCACCAGTATCAACTGTCGATTATCGTCAACAG
CGGCCAGCGCTTGGCCAAGCTGGTCGATGATCTCTTGGACTACCATAAAATGCGTTATGGGCAATTAGACTTAGAACAAG
GCCCTGTCAATCTCAACGCCATCACACAGCTTGTGCTGTCACTCGCCAAACACCTTAAAAAAGATAAGCCGCTAAACATC
ATTAATCAGCTCAGCGACACACCAATCTGGGTACACGCGGACCCCCAACGCCTTGAACAAGTTATGTACAACTTACTGGG
GAATGCGATTAAGTTCACCGATGCGGGTAAGATTGTTATTAGCGCCGACACCCTTGACGATCGCGTTCGCATCCAAGTGG
TTGATACGGGTAAAGGGATCCCAGCGGAACAGTTAAGCACCGTTTTTGAGCCTCTCGCACAAGCAGTAAGTAGCCACTAT
CATTATCAACACGGCGCAGGTCTTGGTCTATCAATCAGTCGTCAGCTTGTCGAGTTGATGGGCGGCCAGCTTTACGTCAG
TAGTCAGACGCAAGTGGGAACCACCTTTAGCTTCACCCTTCCCAGTGTCGATGAGCCCCCGGTGTTGAGCACCGAGTTTA
CCGCCTTTTCTACCCAACACATTCACCAAGCTGACACGCGAGAAGCGCTCGCCCGTTCCTCGTCAGAAGAGGTTAAACCA
AGCGATAATAACAACGGGTTACATATTTTAGTGGTTGATGATGAACCAACCAACCAACAAGTACTCACTAGCTTTCTCAA
TATTGAAGGCTATCAGGTCAGCACAGCAAGCGATGGACGTACAGCCATTGAGCATATCGCCACCACGAAACCGGATCTCA
TTTTGCTCGACGTGCTAATGCCCGGTATGAGTGGGTTCGAAGTCTGCGAGCAGCTTCGAGTACGCTTTGACCATGCTGCA
CTGCCGATTATCATGCTAACCGCCTTAAATCAGCCTGATGATCGCATCTATGGCTTTGAAATCGGTGCGAATGATTACCT
ATGTAAACCCTTTGATAAAAGAGAGCTCGCTGCTCGGATAGCCACACACCTTGCCGCTAGCCAAGCGGAACAACGCCGCC
AAGAAAACCAACGCCTCGAGCAAGCGCTTGAACAAAGTGCGCGGCAGCAAGCCAGCCTACTCGAAACCCAGTCTTGGTTG
ATTTCACAACTCTCTCTCGCCCCTGAAGCCATGTTAGGTATGCGAAGAGATGGCCAGGTTCGCTTTGTTAACCAAGCGGC
AGCATCCTTGTTTGGGCGTGAACAAGACGAGGTAAAACGGATGCACGGTCAAGCCTTGGTGAAAGCGCCCGAGCAAGCCA
ATCAGGTGGAGCACTATCAAGGTCCACTTACCATTTATATTGAAGGACAACCACAGGACGTTGACGGTATGCTGCTGCGT
TTTCCAGCAGAGTCTGACATTGACAGCCTGTATGTCATCAACACAGACGCGCCCGTGTCTCAGTCTCGTATACAGAGCCT
AGAAAGCGCCATCGAAGCCTTGTCTGGCTACGCATTAGGCGGAGACTCGAGCCAACTTGAAACGCTTAAAGCAATGGGCG
GAGAATTTGAAGCTCTTGCTGAAAAAGCGCAACACCAACAGCAAGATAAAACCAACACACGTAGACAGCTAATTGTTGAT
GCCATGGTGGCCAGCTTAGATTACTGGGAAGAAGCCACAGGCAAAAGCAAATTCGATTTTGCCGAGCAAAGTGGTCTCTG
GCGCGTCTACCTTGATCGTAGTAGCTTGCAAACCCGCACACTGGATAAGTATCTGCTCATCGAAACCCTGCCAAAAACCC
CGCGATGGCGCACAGTGCTGAGCTCCATTCGCTTCATTCTCGATCATTGTGATAAACGCAGTACAACCCGCACTCAGCTG
GAATCCTATTACCAACAACTGCGCCACCTACTGCTAGAAGACTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-681)

• Response regulator receiver domain (Response_reg) (729-840)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.231	100	0.572