Detailed information NTG0766629

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: O4598_RS07890
• Genome accession: NZ_CP114586
• Coordinates: 1665508..1668912 (+)
• Length: 1134 a.a.
• NCBI ID: WP_269599155.1
• Uniprot ID: -
• Organism: Salinivibrio kushneri strain TGB4
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1660508..1673912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4598_RS07880 (O4598_07880)	rluC	1660606..1661556 (-)	951	WP_269599154.1	23S rRNA pseudouridine(955/2504/2580) synthase RluC	-
O4598_RS07885 (O4598_07885)	rne	1662251..1665199 (+)	2949	WP_269600616.1	ribonuclease E	-
O4598_RS07890 (O4598_07890)	chiS	1665508..1668912 (+)	3405	WP_269599155.1	response regulator	Regulator
O4598_RS07895 (O4598_07895)	-	1669779..1671467 (+)	1689	WP_069362207.1	ABC transporter substrate-binding protein	-
O4598_RS07900 (O4598_07900)	-	1671551..1672543 (+)	993	WP_069362206.1	ABC transporter permease	-
O4598_RS07905 (O4598_07905)	-	1672540..1673568 (+)	1029	WP_077649898.1	ABC transporter permease	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 127218.60 Da
• Isoelectric Point: 6.8772

>NTDB_id=766629 O4598_RS07890 WP_269599155.1 1665508..1668912(+) (chiS) [Salinivibrio kushneri strain TGB4]
MKSLFTAYPFKRLHHTLMLAFLLLSLLPLIVVALFFLNAHSQDLQEQSTAHLLSVRDSKQQQVNDYFAAKEAEVLGFVAS
ELAYASGGHFYGLVNAFQRLRPNIDAARDYAQRRYYLGSGERVKTPVPKDDPHYSATERYRLLHKRYHRAYQALIARADF
DDLLLVDKQGNVTYSVKKLGNFGTNLLSDPHRNARLGQTFAALKQQTQQTKGKLDPTPKVIISDFSAEETDAPVAWLGAP
IIQQGYLHSYALFRLPNHALTKLMAPRETNAIETHLVGDDGKTRAHLTSKSQLISNTPAIEKAIAGETGVTRYQTQSGQT
MLAAYTPIRTHGLKWGLVAEVPTQVAYARIHQLQQLFIVAMLLAILAVVIASHYMSNFITRPLLQLTWAAEKVSAGDLDT
QIHHTRRRDEIGRLAVSFARMRHAIREKLDLIRQQNQTLEANITTIRAQNEELHVANKLKDEFLATTSHELRTPLHGMIG
IAEALIDGANGPISRDHQYQLSIIVNSGQRLAKLVDDLLDYHKMRYGQLDLEQGPVNLNAITQLVLSLAKHLKKDKPLNI
INQLSDTPIWVHADPQRLEQVMYNLLGNAIKFTDAGKIVISADTLDDRVRIQVVDTGKGIPAEQLSTVFEPLAQAVSSHY
HYQHGAGLGLSISRQLVELMGGQLYVSSQPQVGTTFSFTLPRVDEPPVLSTELTAFSTQHIHQDDTREALVHAASEAVEQ
SSKNKGLHILVVDDEPTNQQVLTSFLNIEGYQVNTASDGRTAIDHIATTKPDLILLDVLMPGMSGFEVCEQLRERFDHAA
LPIIMLTALNQPDDRIYGFEVGANDYLCKPFDKRELAARIATHLAASQAEQRRQENQRLEQALEQSAHQQASLLETQSWL
ISQLSLAPEAMLGMRRDGQVRFVNQAAASLFGREQDEVKRMHGQALVKAPEQANHMERYQGPLTIYIEGQPQGVDGMLLR
FPTESDIDSLYVINTDAPVSQSRIQSLESAIEALSGYALGGDSRQLETLKAMGGEFEALAEKAQHQQQDKTNTRRQLIVD
AMVASLDYWEEATGKSKFDFAEQSGLWRVYLDRSSLQTRTLDKYLLIETLPKTPRWRTVLSSIRFILDHCDKRSPTRTQL
ESYYQQLRQLLLDD

Nucleotide

• Length: 3405 bp

>NTDB_id=766629 O4598_RS07890 WP_269599155.1 1665508..1668912(+) (chiS) [Salinivibrio kushneri strain TGB4]
ATGAAATCCTTGTTTACTGCTTACCCATTTAAACGCCTCCATCACACCTTGATGCTGGCCTTTCTGCTACTGAGTCTCCT
CCCTCTCATCGTGGTCGCTTTGTTTTTTCTCAACGCCCATAGCCAAGATCTCCAAGAGCAAAGCACAGCACACCTTTTAT
CGGTTCGCGACAGTAAGCAACAGCAAGTCAACGATTATTTTGCTGCCAAAGAGGCGGAAGTCCTTGGGTTTGTCGCCTCG
GAGCTCGCCTATGCCAGTGGTGGTCATTTTTATGGTTTGGTCAATGCGTTTCAGCGACTACGACCAAACATCGACGCCGC
ACGTGACTACGCGCAACGTCGCTATTATCTTGGATCCGGTGAAAGGGTTAAAACGCCTGTGCCCAAGGACGATCCCCATT
ATTCCGCCACCGAGCGTTATCGGCTGCTCCATAAACGCTATCACCGCGCTTATCAAGCTTTGATCGCTCGCGCCGATTTT
GACGACTTACTCTTGGTCGACAAGCAAGGCAACGTCACCTATTCGGTGAAAAAGCTGGGCAACTTTGGCACTAACTTACT
CTCAGACCCGCATCGTAATGCACGATTAGGGCAGACGTTCGCGGCCCTGAAACAGCAAACGCAACAGACAAAAGGGAAGT
TAGATCCGACCCCTAAGGTGATTATCTCGGACTTTTCCGCTGAAGAGACCGACGCCCCGGTGGCATGGCTTGGCGCCCCT
ATTATTCAGCAAGGGTATCTGCATAGCTACGCGCTGTTCCGGCTTCCTAACCATGCCCTTACTAAGCTGATGGCACCTAG
AGAAACCAATGCGATTGAAACACACCTCGTCGGCGATGATGGCAAGACTCGAGCGCATTTAACCAGCAAAAGTCAGCTGA
TCAGTAACACGCCTGCCATAGAAAAAGCCATAGCCGGAGAAACGGGTGTCACCCGCTATCAAACCCAGTCAGGCCAAACC
ATGCTCGCCGCTTACACCCCCATTCGCACCCACGGTCTGAAATGGGGACTCGTGGCTGAAGTCCCCACGCAAGTGGCCTA
CGCACGTATCCACCAGCTACAACAGCTTTTTATCGTCGCCATGTTACTTGCGATTCTCGCGGTGGTGATTGCCTCGCACT
ATATGTCCAACTTTATTACTCGCCCACTGCTTCAGCTTACATGGGCGGCCGAAAAAGTCAGTGCGGGTGACCTTGATACC
CAAATCCACCACACGCGTCGTCGTGATGAAATCGGGCGTTTGGCGGTTAGCTTTGCCCGTATGCGCCATGCCATTCGCGA
AAAACTAGACTTAATCCGCCAGCAGAATCAGACCTTAGAAGCTAACATCACCACCATACGTGCTCAGAATGAAGAGCTGC
ATGTCGCCAACAAGCTGAAAGATGAATTCTTGGCCACCACCTCTCATGAACTTCGCACTCCATTACACGGCATGATAGGG
ATTGCCGAAGCACTGATTGACGGTGCGAACGGTCCGATTAGTCGCGACCATCAGTATCAACTGTCGATTATCGTGAACAG
CGGCCAGCGCTTGGCCAAGCTGGTCGATGACCTCTTGGACTACCACAAAATGCGCTATGGGCAATTAGACTTGGAGCAAG
GCCCTGTCAACCTCAATGCCATCACTCAGCTTGTGCTGTCACTCGCCAAGCACCTTAAAAAAGATAAGCCGCTAAACATC
ATTAATCAGCTCAGCGACACGCCAATCTGGGTACACGCAGATCCCCAACGTCTTGAGCAAGTTATGTACAATTTACTGGG
AAATGCGATTAAGTTCACCGATGCGGGTAAGATTGTTATTAGCGCCGACACCTTGGACGATCGCGTTCGCATCCAAGTGG
TTGACACGGGTAAAGGGATCCCCGCAGAACAGTTAAGTACCGTTTTTGAGCCGCTCGCACAAGCAGTAAGTAGCCACTAT
CATTATCAACACGGCGCAGGTCTTGGTCTCTCCATCAGTCGTCAACTTGTCGAGCTGATGGGCGGCCAGCTTTACGTCAG
CAGCCAGCCACAAGTGGGCACCACCTTTAGCTTCACCCTTCCGCGTGTCGATGAGCCCCCGGTGTTGAGCACCGAGCTTA
CCGCCTTCTCTACCCAGCACATTCATCAAGATGACACGAGAGAGGCGCTCGTTCACGCCGCTTCGGAAGCCGTTGAACAA
AGTAGTAAGAACAAAGGGTTACATATTTTAGTCGTCGATGATGAGCCCACCAATCAACAAGTACTCACCAGCTTTCTAAA
TATTGAAGGCTATCAGGTCAATACAGCAAGCGATGGGCGCACAGCGATTGATCATATCGCCACCACAAAGCCAGATCTAA
TCTTACTCGACGTGCTCATGCCCGGCATGAGTGGGTTCGAGGTCTGCGAGCAGCTGCGAGAGCGCTTTGACCATGCCGCC
CTTCCGATTATCATGCTGACCGCCTTAAATCAGCCTGATGATCGCATCTATGGCTTTGAGGTCGGCGCCAATGATTACCT
CTGTAAGCCCTTTGACAAAAGAGAGCTTGCCGCACGGATAGCCACACATCTTGCCGCTAGCCAAGCGGAACAACGCCGCC
AAGAAAACCAACGCCTCGAGCAGGCACTTGAACAAAGTGCCCACCAACAAGCCAGCCTACTTGAAACCCAGTCTTGGTTG
ATTTCACAGCTCTCTCTCGCCCCTGAAGCCATGTTAGGTATGCGAAGAGATGGCCAGGTTCGCTTTGTTAACCAAGCGGC
AGCCTCCTTATTTGGGCGTGAACAGGACGAGGTAAAACGGATGCACGGTCAAGCCTTAGTGAAAGCGCCCGAGCAGGCCA
ATCATATGGAGCGCTATCAAGGCCCACTGACCATTTATATTGAAGGACAACCCCAAGGCGTTGACGGTATGCTGCTGCGT
TTTCCAACCGAGTCTGACATTGATAGCCTGTATGTCATCAACACAGACGCGCCCGTGTCTCAGTCTCGTATACAGAGTCT
AGAAAGCGCCATCGAAGCCTTATCTGGCTACGCATTAGGCGGAGACTCGCGCCAACTTGAAACGCTTAAAGCGATGGGCG
GGGAATTTGAAGCCCTTGCGGAAAAAGCGCAACACCAACAGCAAGATAAAACCAACACACGTAGACAGCTAATTGTTGAT
GCCATGGTAGCCAGCTTAGATTACTGGGAAGAAGCCACAGGCAAAAGCAAATTCGATTTTGCCGAGCAAAGTGGTCTCTG
GCGCGTCTACCTTGATCGTAGTAGCTTACAAACCCGCACACTGGATAAGTACCTGCTCATCGAAACCCTGCCAAAAACCC
CGCGGTGGCGCACCGTGCTGAGCTCCATTCGCTTTATCCTCGATCATTGCGATAAACGCAGTCCGACCCGCACTCAGCTG
GAGTCCTATTACCAACAACTTCGCCAGCTACTGCTAGACGACTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• Response regulator receiver domain (Response_reg) (729-840)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.168	100	0.573