Detailed information NTG0766479

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LpnH3D14_RS14465
• Genome accession: NZ_CP114576
• Coordinates: 3202213..3203280 (-)
• Length: 355 a.a.
• NCBI ID: WP_013101927.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain H3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3197213..3208280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LpnH3D14_RS14440 (LpnH3D14_02908)	-	3197503..3198219 (-)	717	WP_011947578.1	dienelactone hydrolase family protein	-
LpnH3D14_RS14445 (LpnH3D14_02909)	-	3198500..3199366 (+)	867	WP_027223995.1	alpha/beta hydrolase	-
LpnH3D14_RS14450 (LpnH3D14_02910)	rpoH	3199501..3200355 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
LpnH3D14_RS14455 (LpnH3D14_02911)	ftsX	3200653..3201582 (-)	930	WP_013101925.1	permease-like cell division protein FtsX	-
LpnH3D14_RS14460 (LpnH3D14_02912)	ftsE	3201576..3202226 (-)	651	WP_013101926.1	cell division ATP-binding protein FtsE	-
LpnH3D14_RS14465 (LpnH3D14_02913)	pilA	3202213..3203280 (-)	1068	WP_013101927.1	signal recognition particle-docking protein FtsY	Machinery gene
LpnH3D14_RS14470 (LpnH3D14_02914)	-	3203343..3204668 (+)	1326	WP_013101928.1	M16 family metallopeptidase	-
LpnH3D14_RS14475 (LpnH3D14_02915)	-	3204665..3205969 (+)	1305	WP_013101929.1	M16 family metallopeptidase	-
LpnH3D14_RS14480 (LpnH3D14_02916)	rsmD	3205966..3206511 (+)	546	WP_042645977.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LpnH3D14_RS14485 (LpnH3D14_02917)	dotD	3206586..3207077 (+)	492	WP_014842716.1	type IVB secretion system lipoprotein DotD	-
LpnH3D14_RS14490 (LpnH3D14_02918)	dotC	3207058..3207969 (+)	912	WP_011216545.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39059.65 Da
• Isoelectric Point: 5.9087

>NTDB_id=766479 LpnH3D14_RS14465 WP_013101927.1 3202213..3203280(-) (pilA) [Legionella pneumophila strain H3]
MIKWFKRNQNSEPNLDTEEQQDHAESSMESRLEEPKELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDILIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=766479 LpnH3D14_RS14465 WP_013101927.1 3202213..3203280(-) (pilA) [Legionella pneumophila strain H3]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAACAAGATCATGCCGAAAGCAG
CATGGAATCCAGGCTTGAAGAGCCCAAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATTAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCAGACTCTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGTTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCTGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCTGCTGCGGTGGAGCAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATATTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAATGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCAATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-130)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.811	84.789	0.482