Detailed information NTG0766340

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QIH95_RS46265
• Genome accession: NZ_CP126013
• Coordinates: 9577628..9578614 (+)
• Length: 328 a.a.
• NCBI ID: WP_038954640.1
• Uniprot ID: A0ABV2RJ88
• Organism: Bradyrhizobium japonicum strain S11L-Bj
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 9572628..9583614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH95_RS46245 (QIH95_46245)	-	9572960..9574558 (+)	1599	WP_038954645.1	ABC transporter substrate-binding protein	-
QIH95_RS46250 (QIH95_46250)	-	9574594..9575541 (+)	948	WP_014491190.1	ABC transporter permease	-
QIH95_RS46255 (QIH95_46255)	-	9575731..9576624 (+)	894	WP_038954643.1	ABC transporter permease	-
QIH95_RS46260 (QIH95_46260)	-	9576624..9577631 (+)	1008	WP_014491188.1	ABC transporter ATP-binding protein	-
QIH95_RS46265 (QIH95_46265)	amiE	9577628..9578614 (+)	987	WP_038954640.1	ABC transporter ATP-binding protein	Regulator
QIH95_RS46270 (QIH95_46270)	-	9578586..9579398 (-)	813	WP_038954638.1	hypothetical protein	-
QIH95_RS46275 (QIH95_46275)	-	9579638..9581611 (-)	1974	WP_038954637.1	acetyl-CoA carboxylase biotin carboxylase subunit	-
QIH95_RS46280 (QIH95_46280)	-	9581608..9583224 (-)	1617	WP_038954636.1	acyl-CoA carboxylase subunit beta	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 35787.26 Da
• Isoelectric Point: 8.8322

>NTDB_id=766340 QIH95_RS46265 WP_038954640.1 9577628..9578614(+) (amiE) [Bradyrhizobium japonicum strain S11L-Bj]
MTEALLEVTDLKKHYAVRAGVLRRQVGTVHAVDGVSFSVHTGETLGLVGESGCGKSTVARSVLRLVEPTSGQIRLDGEDI
TRLSKTALRPHRRSMQIVFQDPFASLNPRMTAGDIVGEPLAVHGLASGKELEARTAKLFEQVGLRPDQMRNFPHQFSGGQ
RQRICIARALALGPRLIVCDEPVSALDVSIQAQVINLLIDLQKQHGFSYLFIAHDLAVVAHISHRVAVMYLGRIVEIADK
DELFRNPRHPYTQALLASVPVANPFAKKLAPLVDGDVPSPVNPPSGCAFHTRCRFAMERCKTERPALVDAGDRHQVACLL
NEGTGRGQ

Nucleotide

• Length: 987 bp

>NTDB_id=766340 QIH95_RS46265 WP_038954640.1 9577628..9578614(+) (amiE) [Bradyrhizobium japonicum strain S11L-Bj]
ATGACCGAAGCGCTGCTCGAAGTCACCGATCTCAAGAAGCACTATGCGGTGCGCGCCGGCGTGTTGCGGCGGCAGGTCGG
CACCGTGCATGCGGTCGACGGCGTCTCGTTCTCGGTTCATACCGGCGAAACGCTCGGCCTTGTCGGCGAATCCGGCTGCG
GCAAGTCGACGGTGGCGCGCAGCGTGCTGCGGCTGGTCGAGCCGACTTCGGGCCAGATCCGCCTTGATGGAGAGGACATC
ACCCGTCTCTCCAAGACCGCGCTACGGCCGCATCGCCGCTCAATGCAGATCGTGTTCCAGGACCCGTTCGCTTCGCTCAA
TCCGCGCATGACCGCCGGCGACATCGTCGGTGAACCGCTCGCCGTGCATGGGCTCGCAAGCGGCAAGGAGCTGGAAGCGC
GTACCGCAAAACTGTTCGAGCAGGTGGGCCTGCGGCCCGATCAGATGCGCAACTTCCCGCACCAATTTTCCGGCGGCCAG
CGCCAGCGCATCTGCATCGCGCGGGCGCTTGCGCTGGGGCCGCGCCTGATCGTCTGCGACGAGCCGGTCTCCGCGCTCGA
CGTCTCGATCCAGGCGCAGGTGATCAATCTCCTGATCGACCTGCAAAAGCAGCACGGCTTCTCCTATCTCTTCATCGCCC
ACGACCTCGCCGTGGTCGCCCATATCAGCCACCGCGTCGCCGTGATGTATCTCGGCCGCATCGTCGAGATCGCCGACAAG
GACGAGCTGTTCCGCAATCCGCGCCATCCCTACACGCAGGCCCTGCTTGCGTCAGTGCCGGTTGCAAACCCGTTTGCCAA
GAAGCTCGCGCCGTTGGTCGACGGCGACGTGCCGAGCCCGGTCAATCCGCCATCTGGCTGCGCGTTTCACACCCGCTGCC
GGTTTGCGATGGAGCGGTGCAAGACGGAGCGGCCGGCGCTGGTGGACGCTGGTGATAGGCATCAGGTGGCGTGTCTGCTC
AACGAGGGGACGGGGCGGGGTCAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (33-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	39.94	100	0.405
amiE	Streptococcus thermophilus LMD-9	39.339	100	0.399
amiE	Streptococcus thermophilus LMG 18311	39.339	100	0.399
oppD	Streptococcus mutans UA159	39.815	98.78	0.393
amiF	Streptococcus salivarius strain HSISS4	45.588	82.927	0.378
amiF	Streptococcus thermophilus LMG 18311	45.185	82.317	0.372
amiF	Streptococcus thermophilus LMD-9	45.185	82.317	0.372