Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   CC22TP_RS08465 Genome accession   NZ_AP025177
Coordinates   1760801..1762075 (+) Length   424 a.a.
NCBI ID   WP_217654569.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TPS6281     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1755801..1767075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CC22TP_RS08445 - 1757125..1757220 (+) 96 WP_031789489.1 hypothetical protein -
  CC22TP_RS08450 (TPS6281TP_16150) - 1757181..1758311 (-) 1131 WP_000721707.1 HAD family hydrolase -
  CC22TP_RS08455 (TPS6281TP_16160) nagE 1758418..1759884 (-) 1467 WP_229346813.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  CC22TP_RS08460 (TPS6281TP_16170) - 1760012..1760629 (-) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  CC22TP_RS08465 (TPS6281TP_16180) htrA 1760801..1762075 (+) 1275 WP_217654569.1 S1C family serine protease Regulator
  CC22TP_RS08470 (TPS6281TP_16190) tyrS 1762169..1763431 (-) 1263 WP_000186027.1 tyrosine--tRNA ligase -
  CC22TP_RS08475 (TPS6281TP_16200) - 1763812..1764717 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  CC22TP_RS08480 - 1764697..1764789 (-) 93 WP_001789987.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45833.01 Da        Isoelectric Point: 9.9696

>NTDB_id=76623 CC22TP_RS08465 WP_217654569.1 1760801..1762075(+) (htrA) [Staphylococcus aureus strain TPS6281]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALITGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=76623 CC22TP_RS08465 WP_217654569.1 1760801..1762075(+) (htrA) [Staphylococcus aureus strain TPS6281]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTACTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.303

94.811

0.373


Multiple sequence alignment